TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)

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Synonym

HpaII tiny fragments locus 9C, HTF9C, MGC102728

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.42 cerebellum:6.43 brain stem:6.52 corpus callosum/glia:6.34 pineal gland:- peripheral nerve:6.24 spine:6.38 retina:- eye:- artery/aorta:6.37 vein:6.34 lymphnode:6.60 peripheral blood:- spleen:6.35 thymus:6.72 bone marrow:6.51 adipose:6.41 bone:- skin:6.46
CAGE cerebrum:2.99 cerebellum:- brain stem:2.79 corpus callosum/glia:3.16 pineal gland:2.96 peripheral nerve:- spine:2.89 retina:- eye:- artery/aorta:2.78 vein:3.42 lymphnode:3.05 peripheral blood:- spleen:2.89 thymus:3.35 bone marrow:- adipose:2.98 bone:- skin:-
RNA-seq cerebrum:0.94 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.65 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.42 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:6.34 placenta:6.13 prostate:6.40 ovary:6.26 testis:6.91 heart:6.20 muscle:6.44 esophagus:6.39 stomach:6.34 intestine:6.34 colon:6.22 liver/hepato:6.64 lung:6.31 bladder:- kidney:6.26 pituitary:6.62 thyroid/parathyroid:6.50 adrenal gland:6.55 pancreas:6.42 breast:6.34 salivary:6.80
CAGE uterus:2.94 placenta:2.96 prostate:2.91 ovary:2.98 testis:3.13 heart:2.78 muscle:2.73 esophagus:3.00 stomach:- intestine:2.68 colon:3.27     liver/hepato:3.12    lung:2.72 bladder:2.69 kidney:2.56 pituitary:3.14 thyroid/parathyroid:2.90 adrenal gland:- pancreas:2.98 breast:2.87 salivary:3.27
RNA-seq uterus:- placenta:- prostate:1.87 ovary:1.88 testis:1.76 heart:0.98 muscle:1.42 esophagus:- stomach:- intestine:- colon:1.07     liver/hepato:1.21        lung:0.86    bladder:- kidney:1.35 pituitary:- thyroid/parathyroid:1.85 adrenal gland:1.20 pancreas:- breast:1.56 salivary:-

Gene Information

IDs

Refseq ID NM_022727
Gene ID 27037
Unigene ID -
Probe set ID 218475_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000099899
GTEx ID ENSG00000099899

Orthologous Gene

Mouse[8]  NM_001080999, NM_001081000, NM_001195205
Rat [0]  

Chromosomal Region

22q11.21  [20,099,389  -  20,104,915]

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

9417108
10591208
12477932
14702039
15461802
15489334
18029348
18075473
19615732
20307320
21252943
21832049
21890473
21900206
21903422
22678362
22939629
24163370
24250222
24778252

Gene Ontology  (GO ID)

Biological Process

GO:0006396  RNA processing

Molecular Function

GO:0000166  nucleotide binding
GO:0003723  RNA binding
GO:0008173  RNA methyltransferase activity