integrin, beta 4

jump to detail

Synonym

integrin, beta 4, ITGB4, CD104 antigen, CD104, Integrin beta-4 precursor, GP150

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:16.60

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:148.30

peripheral nerve:61.30

spine:112.30

retina:-

eye:146.90

artery/aorta:30

vein:-

lymphnode:-

peripheral blood:-

spleen:-

thymus:38.70

bone marrow:-

adipose:-

bone:-

skin:76.80

GeneChip

cerebrum:6.47

cerebellum:5.89

brain stem:6.48

corpus callosum/glia:7.45

pineal gland:-

peripheral nerve:8.34

spine:7.73

retina:-

eye:-

artery/aorta:7.01

vein:6.32

lymphnode:6.40

peripheral blood:-

spleen:7.37

thymus:5.58

bone marrow:5.29

adipose:6.79

bone:-

skin:7.38

CAGE

cerebrum:3.07

cerebellum:-

brain stem:2.75

corpus callosum/glia:3.93

pineal gland:2.55

peripheral nerve:-

spine:3.82

retina:-

eye:-

artery/aorta:3.17

vein:3.15

lymphnode:3.24

peripheral blood:-

spleen:3.72

thymus:1.94

bone marrow:-

adipose:2.96

bone:-

skin:-

RNA-seq

cerebrum:0.28

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.31

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.36

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:154.90

placenta:185.80

prostate:101.40

ovary:-

testis:8.70

heart:114.90

muscle:-

esophagus:-

stomach:21.20

intestine:-

colon:432.50

liver/hepato:-

lung:19.60

bladder:-

kidney:-

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:44.50

breast:529.70

salivary:-

GeneChip

uterus:6.49

placenta:8.09

prostate:6.79

ovary:6.56

testis:5.45

heart:6.04

muscle:6.20

esophagus:7.36

stomach:7.26

intestine:6.77

colon:7.33

liver/hepato:5.90

lung:6.73

bladder:-

kidney:6.20

pituitary:5.92

thyroid/parathyroid:6.10

adrenal gland:5.86

pancreas:6.05

breast:7.84

salivary:8.01

CAGE

uterus:3.71

placenta:4.95

prostate:3.91

ovary:2.83

testis:2.23

heart:2.71

muscle:2.00

esophagus:4.14

stomach:-

intestine:5.16

colon:4.54

liver/hepato:0.90

lung:3.28

bladder:3.77

kidney:2.48

pituitary:2.24

thyroid/parathyroid:2.16

adrenal gland:-

pancreas:2.86

breast:3.71

salivary:4.86

RNA-seq

uterus:-

placenta:-

prostate:0.69

ovary:0.25

testis:0.11

heart:0.00

muscle:0.09

esophagus:-

stomach:-

intestine:-

colon:0.42

liver/hepato:0.00

lung:0.07

bladder:-

kidney:0.18

pituitary:-

thyroid/parathyroid:0.24

adrenal gland:0.72

pancreas:-

breast:0.95

salivary:-

IDs

Refseq ID	NM_000213
Gene ID	3691
Unigene ID	Hs.632226
Probe set ID	204990_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000132470
GTEx ID	ENSG00000132470

Orthologous Gene

Mouse[2]	NM_001005608, NM_133663
Rat [0]

Chromosomal Region

17q25.1 [73,713,474 - 73,753,898]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR003961	Fibronectin, type III
IPR008957	Fibronectin, type III-like fold
IPR015812	Integrin beta subunit
IPR012013	Integrin beta-4 subunit
IPR003659	Plexin/semaphorin/integrin

GO:0007155	cell adhesion
GO:0034329	cell junction assembly
GO:0048870	cell motility
GO:0007160	cell-matrix adhesion
GO:0030198	extracellular matrix organization
GO:0046847	filopodium assembly
GO:0031581	hemidesmosome assembly
GO:0007229	integrin-mediated signaling pathway
GO:0007275	multicellular organismal development
GO:0009611	response to wounding

GO:0009925	basal plasma membrane
GO:0005604	basement membrane
GO:0031252	cell leading edge
GO:0009986	cell surface
GO:0030056	hemidesmosome
GO:0008305	integrin complex
GO:0005886	plasma membrane

GO:0005515	protein binding
GO:0004872	receptor activity

integrin, beta 4

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function