radical S-adenosyl methionine domain containing 1

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Synonym

radical S-adenosyl methionine domain containing 1, FLJ20975, RSAD1, FLJ11164

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:51 cerebellum:88.20 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:88.20 artery/aorta:89.90 vein:- lymphnode:40.40 peripheral blood:54.70 spleen:56.70 thymus:38.70 bone marrow:- adipose:161.30 bone:38.40 skin:38.40
GeneChip cerebrum:7.13 cerebellum:7.56 brain stem:6.93 corpus callosum/glia:6.85 pineal gland:- peripheral nerve:7.04 spine:6.86 retina:- eye:- artery/aorta:7.37 vein:6.71 lymphnode:7.52 peripheral blood:- spleen:7.48 thymus:7.36 bone marrow:6.64 adipose:7.19 bone:- skin:7.35
CAGE cerebrum:3.01 cerebellum:- brain stem:2.70 corpus callosum/glia:2.67 pineal gland:2.77 peripheral nerve:- spine:3.26 retina:- eye:- artery/aorta:2.90 vein:2.89 lymphnode:2.72 peripheral blood:- spleen:2.33 thymus:2.39 bone marrow:- adipose:2.71 bone:- skin:-
RNA-seq cerebrum:3.02 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.81 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.43 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:40.10 prostate:56.30 ovary:- testis:21.60 heart:127.70 muscle:60.30 esophagus:342.80 stomach:63.70 intestine:97.20 colon:50.90     liver/hepato:21.10        lung:68.40    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:- adrenal gland:101.60 pancreas:44.50 breast:55.80 salivary:-
GeneChip uterus:7.28 placenta:6.89 prostate:7.13 ovary:7.07 testis:6.77 heart:7.25 muscle:7.41 esophagus:6.91 stomach:7.18 intestine:7.14 colon:7.06 liver/hepato:7.64 lung:7.05 bladder:- kidney:7.83 pituitary:7.22 thyroid/parathyroid:7.41 adrenal gland:7.74 pancreas:7.21 breast:7.28 salivary:7.27
CAGE uterus:2.57 placenta:2.17 prostate:2.69 ovary:2.58 testis:2.22 heart:3.09 muscle:2.94 esophagus:2.20 stomach:- intestine:2.53 colon:2.88     liver/hepato:2.98    lung:2.69 bladder:2.37 kidney:2.43 pituitary:2.48 thyroid/parathyroid:2.52 adrenal gland:- pancreas:3.75 breast:2.79 salivary:2.60
RNA-seq uterus:- placenta:- prostate:3.63 ovary:3.78 testis:3.03 heart:3.56 muscle:3.61 esophagus:- stomach:- intestine:- colon:2.64     liver/hepato:3.22        lung:2.77    bladder:- kidney:4.03 pituitary:- thyroid/parathyroid:3.38 adrenal gland:3.31 pancreas:- breast:3.07 salivary:-

Gene Information

IDs

Refseq ID NM_018346
Gene ID 55316
Unigene ID Hs.8033
Probe set ID 218307_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000136444
GTEx ID ENSG00000136444

Orthologous Gene

Mouse[1]  NM_001013381
Rat[1]  NM_001013381

Chromosomal Region

17q21.33  [48,556,161  -  48,563,336]

Gene Family (Interpro ID)

IPR006638  Elongator protein 3/MiaB/NifB
IPR007197  Radical SAM

Link to Pubmed  (Pubmed ID)

8125298
12477932
14702039
20877624

Gene Ontology  (GO ID)

Biological Process

GO:0006779  porphyrin biosynthetic process

Cellular Component

GO:0005739  mitochondrion

Molecular Function

GO:0051539  4 iron, 4 sulfur cluster binding
GO:0004109  coproporphyrinogen oxidase activity
GO:0046872  metal ion binding