polypyrimidine tract binding protein 1

Synonym

PTBP1, HNRNPI, Polypyrimidine tract-binding protein 1, PTB3, PTB-T, PTB-1, MGC8461, 57 kDa RNA-binding protein PPTB-1, HNRPI, Heterogeneous nuclear ribonucleoprotein I, MGC10830, PTB2, PTB, hnRNP I, polypyrimidine tract binding protein 1, PTB4, pPTB

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:55.70

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:148.30

peripheral nerve:92

spine:112.30

retina:237.30

eye:199.80

artery/aorta:30

vein:66.60

lymphnode:727.90

peripheral blood:382.60

spleen:56.70

thymus:38.70

bone marrow:137.80

adipose:-

bone:38.40

skin:110.40

GeneChip

cerebrum:6.68

cerebellum:7.02

brain stem:6.62

corpus callosum/glia:7.41

pineal gland:-

peripheral nerve:7.89

spine:7.37

retina:-

eye:-

artery/aorta:8.58

vein:8.36

lymphnode:9.17

peripheral blood:-

spleen:9.22

thymus:9.73

bone marrow:9.08

adipose:8.74

bone:-

skin:8.94

CAGE

cerebrum:3.57

cerebellum:-

brain stem:3.73

corpus callosum/glia:4.04

pineal gland:3.43

peripheral nerve:-

spine:3.74

retina:-

eye:-

artery/aorta:4.66

vein:4.75

lymphnode:5.10

peripheral blood:-

spleen:4.92

thymus:5.42

bone marrow:-

adipose:4.72

bone:-

skin:-

RNA-seq

cerebrum:1.52

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.20

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:4.76

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:118.50

placenta:710.40

prostate:67.60

ovary:186.30

testis:138.40

heart:293.70

muscle:40.20

esophagus:-

stomach:85

intestine:32.40

colon:135.70

liver/hepato:190

lung:127.10

bladder:-

kidney:156

pituitary:-

thyroid/parathyroid:-

adrenal gland:50.80

pancreas:400.10

breast:269.50

salivary:-

GeneChip

uterus:8.88

placenta:9.21

prostate:8.99

ovary:9.17

testis:8.55

heart:7.60

muscle:6.66

esophagus:9.18

stomach:8.71

intestine:8.56

colon:8.99

liver/hepato:8.50

lung:9.21

bladder:-

kidney:8.93

pituitary:8.62

thyroid/parathyroid:9.21

adrenal gland:8.57

pancreas:8.35

breast:9.25

salivary:8.83

CAGE

uterus:4.79

placenta:5.13

prostate:4.66

ovary:4.90

testis:4.66

heart:4.06

muscle:3.18

esophagus:4.76

stomach:-

intestine:4.73

colon:4.74

liver/hepato:5.09

lung:4.57

bladder:4.49

kidney:4.81

pituitary:4.56

thyroid/parathyroid:4.87

adrenal gland:-

pancreas:4.79

breast:4.72

salivary:5.13

RNA-seq

uterus:-

placenta:-

prostate:4.20

ovary:4.90

testis:4.71

heart:2.72

muscle:3.18

esophagus:-

stomach:-

intestine:-

colon:3.77

liver/hepato:3.39

lung:4.14

bladder:-

kidney:4.25

pituitary:-

thyroid/parathyroid:4.72

adrenal gland:4.76

pancreas:-

breast:3.99

salivary:-

IDs

Refseq ID	NM_002819
Gene ID	5725
Unigene ID	Hs.172550
Probe set ID	216306_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000011304
GTEx ID	ENSG00000011304

Orthologous Gene

Mouse[8]	NM_001077363, NM_008956
Rat [0]

Chromosomal Region

19p13.3 [797,392 - 812,327]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000504

RNA recognition motif, RNP-1

GO:0000380	alternative nuclear mRNA splicing, via spliceosome
GO:0010467	gene expression
GO:0006397	mRNA processing
GO:0051148	negative regulation of muscle cell differentiation
GO:0048025	negative regulation of nuclear mRNA splicing, via spliceosome
GO:0033119	negative regulation of RNA splicing
GO:0000398	nuclear mRNA splicing, via spliceosome
GO:0000381	regulation of alternative nuclear mRNA splicing, via spliceosome
GO:0008380	RNA splicing

GO:0005730	nucleolus
GO:0005654	nucleoplasm

GO:0000166	nucleotide binding
GO:0008187	poly-pyrimidine tract binding
GO:0005515	protein binding
GO:0003723	RNA binding

polypyrimidine tract binding protein 1

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function