survival of motor neuron 2, centromeric

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Synonym

C-BCD541

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:105.50

cerebellum:88.20

brain stem:-

corpus callosum/glia:29.20

pineal gland:148.30

peripheral nerve:460.10

spine:112.30

retina:474.60

eye:188.10

artery/aorta:60

vein:-

lymphnode:273

peripheral blood:91.10

spleen:18.90

thymus:116

bone marrow:118.10

adipose:-

bone:38.40

skin:158.40

GeneChip

cerebrum:6.05

cerebellum:6.34

brain stem:6.01

corpus callosum/glia:6.44

pineal gland:-

peripheral nerve:6.46

spine:6.25

retina:-

eye:-

artery/aorta:6.37

vein:6.32

lymphnode:6.55

peripheral blood:-

spleen:6.93

thymus:7.71

bone marrow:6.60

adipose:6.44

bone:-

skin:6.69

CAGE

nodata

RNA-seq

cerebrum:0.17

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:0.00

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.00

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:182.30

placenta:109.30

prostate:135.20

ovary:111.80

testis:272.60

heart:217.10

muscle:40.20

esophagus:-

stomach:531.10

intestine:32.40

colon:178.10

liver/hepato:73.90

lung:88

bladder:125.60

kidney:124.80

pituitary:116

thyroid/parathyroid:491.20

adrenal gland:152.40

pancreas:275.60

breast:390.30

salivary:-

GeneChip

uterus:7.06

placenta:6.63

prostate:6.91

ovary:7.02

testis:7.05

heart:6.39

muscle:5.98

esophagus:6.60

stomach:6.69

intestine:6.99

colon:6.42

liver/hepato:6.32

lung:6.91

bladder:-

kidney:6

pituitary:6.22

thyroid/parathyroid:6.46

adrenal gland:6.33

pancreas:6.44

breast:6.56

salivary:6.36

CAGE

nodata

RNA-seq

uterus:-

placenta:-

prostate:0.00

ovary:0.00

testis:0.23

heart:0.00

muscle:0.00

esophagus:-

stomach:-

intestine:-

colon:0.00

liver/hepato:0.00

lung:0.00

bladder:-

kidney:0.00

pituitary:-

thyroid/parathyroid:0.00

adrenal gland:0.00

pancreas:-

breast:0.00

salivary:-

IDs

Refseq ID	NM_022876
Gene ID	6607
Unigene ID	Hs.202179
Probe set ID	203852_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000172062 ENSG00000205571
GTEx ID	ENSG00000172062 ENSG00000205571

Orthologous Gene

Mouse [0]
Rat [0]

Chromosomal Region

5q13.2 [69,345,350 - 69,374,349]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

5q13.2 [70,220,768 - 70,249,769]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR002999	Tudor domain
IPR018351	Tudor subgroup

Gene Ontology (GO ID)

Biological Process

GO:0008219	cell death
GO:0010467	gene expression
GO:0034660	ncRNA metabolic process
GO:0016070	RNA metabolic process
GO:0000387	spliceosomal snRNP assembly
GO:0000245	spliceosome assembly

Cellular Component

GO:0015030	Cajal body
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005654	nucleoplasm
GO:0005681	spliceosomal complex

Molecular Function

GO:0005515	protein binding
GO:0003723	RNA binding