Sjogren syndrome antigen B (autoantigen La)

Synonym

Lupus La protein, Sjoegren syndrome type B antigen, La, SSB, SS-B, LARP3, La ribonucleoprotein, La autoantigen, Sjogren syndrome antigen B (autoantigen La)

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:65.20

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:61.30

spine:-

retina:-

eye:70.50

artery/aorta:119.90

vein:66.60

lymphnode:80.90

peripheral blood:54.70

spleen:37.80

thymus:51.50

bone marrow:59

adipose:80.70

bone:25.60

skin:110.40

GeneChip

cerebrum:7.22

cerebellum:7.23

brain stem:7.41

corpus callosum/glia:7.08

pineal gland:-

peripheral nerve:7.30

spine:7.04

retina:-

eye:-

artery/aorta:7.45

vein:7.04

lymphnode:7.35

peripheral blood:-

spleen:6.91

thymus:7.78

bone marrow:6.94

adipose:7.51

bone:-

skin:6.90

CAGE

cerebrum:4.27

cerebellum:-

brain stem:4.44

corpus callosum/glia:3.72

pineal gland:4.66

peripheral nerve:-

spine:4.47

retina:-

eye:-

artery/aorta:3.55

vein:3.95

lymphnode:3.56

peripheral blood:-

spleen:4.54

thymus:4.14

bone marrow:-

adipose:4.86

bone:-

skin:-

RNA-seq

cerebrum:5.42

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:5.11

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.63

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:72.90

placenta:61.90

prostate:101.40

ovary:186.30

testis:82.20

heart:38.30

muscle:80.40

esophagus:-

stomach:191.20

intestine:32.40

colon:59.40

liver/hepato:126.70

lung:112.40

bladder:-

kidney:62.40

pituitary:232

thyroid/parathyroid:163.70

adrenal gland:50.80

pancreas:71.10

breast:83.60

salivary:-

GeneChip

uterus:7.64

placenta:6.95

prostate:7.85

ovary:7.83

testis:6.58

heart:7.07

muscle:6.62

esophagus:6.78

stomach:6.85

intestine:6.52

colon:5.41

liver/hepato:6.70

lung:7.10

bladder:-

kidney:6.02

pituitary:7.22

thyroid/parathyroid:7.12

adrenal gland:7.45

pancreas:6.25

breast:6.65

salivary:6.20

CAGE

uterus:4.13

placenta:4.33

prostate:4.59

ovary:4.56

testis:3.56

heart:4.25

muscle:4.46

esophagus:4.33

stomach:-

intestine:4.12

colon:3.79

liver/hepato:4.38

lung:4.01

bladder:4.65

kidney:4.73

pituitary:4.90

thyroid/parathyroid:4.53

adrenal gland:-

pancreas:2.81

breast:4.62

salivary:2.80

RNA-seq

uterus:-

placenta:-

prostate:5.58

ovary:5.88

testis:5.66

heart:4.27

muscle:3.63

esophagus:-

stomach:-

intestine:-

colon:5.80

liver/hepato:4.28

lung:4.77

bladder:-

kidney:5.56

pituitary:-

thyroid/parathyroid:6.03

adrenal gland:5.39

pancreas:-

breast:5.74

salivary:-

IDs

Refseq ID	NM_003142
Gene ID	6741
Unigene ID	Hs.632535
Probe set ID	201139_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000138385
GTEx ID	ENSG00000138385

Orthologous Gene

Mouse[8]	NM_001110145, NM_009278
Rat[8]	NM_001110145, NM_009278

Chromosomal Region

2q31.1 [170,648,443 - 170,668,574]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000504	RNA recognition motif, RNP-1
IPR006630	RNA-binding protein Lupus La
IPR011991	Winged helix repressor DNA-binding

Gene Ontology (GO ID)

Biological Process

GO:0008334	histone mRNA metabolic process
GO:0006400	tRNA modification

Cellular Component

GO:0005634	nucleus
GO:0030529	ribonucleoprotein complex

Molecular Function

GO:0003729	mRNA binding
GO:0000166	nucleotide binding
GO:0000049	tRNA binding

Sjogren syndrome antigen B (autoantigen La)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function