alveolar soft part sarcoma chromosome region, candidate 1

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Synonym

ASPL, Renal papillary cell carcinoma protein 17, ASPSCR1, ASPS, UBXD9, ASPCR1, Tether containing UBX domain for GLUT4, Alveolar soft part sarcoma locus, RCC17, TUG

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:30.80 cerebellum:50.40 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:23.50 artery/aorta:- vein:- lymphnode:40.40 peripheral blood:109.30 spleen:56.70 thymus:90.20 bone marrow:59 adipose:- bone:- skin:4.80
GeneChip cerebrum:5.89 cerebellum:6.14 brain stem:5.88 corpus callosum/glia:5.91 pineal gland:- peripheral nerve:5.83 spine:5.74 retina:- eye:- artery/aorta:5.94 vein:5.59 lymphnode:5.84 peripheral blood:- spleen:5.64 thymus:5.83 bone marrow:5.61 adipose:5.74 bone:- skin:5.86
CAGE cerebrum:2.50 cerebellum:- brain stem:2.68 corpus callosum/glia:2.65 pineal gland:2.40 peripheral nerve:- spine:2.30 retina:- eye:- artery/aorta:2.41 vein:2.29 lymphnode:2.28 peripheral blood:- spleen:2.06 thymus:1.97 bone marrow:- adipose:2.08 bone:- skin:-
RNA-seq cerebrum:1.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.12 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.27 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:80.10 prostate:67.60 ovary:- testis:26 heart:38.30 muscle:40.20 esophagus:- stomach:- intestine:32.40 colon:8.50     liver/hepato:-        lung:24.40    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:62.20 breast:27.90 salivary:-
GeneChip uterus:5.66 placenta:6.22 prostate:5.76 ovary:5.58 testis:7.01 heart:5.55 muscle:6.01 esophagus:5.77 stomach:5.73 intestine:5.87 colon:5.71 liver/hepato:6.60 lung:5.80 bladder:- kidney:6.23 pituitary:6.45 thyroid/parathyroid:6.25 adrenal gland:5.84 pancreas:5.83 breast:5.90 salivary:5.93
CAGE uterus:1.73 placenta:2.73 prostate:2.04 ovary:1.99 testis:2.72 heart:2.17 muscle:2.71 esophagus:1.98 stomach:- intestine:2.39 colon:2.48     liver/hepato:2.50    lung:2.45 bladder:1.84 kidney:2.34 pituitary:2.01 thyroid/parathyroid:2.47 adrenal gland:- pancreas:2.34 breast:2.19 salivary:1.67
RNA-seq uterus:- placenta:- prostate:2.10 ovary:2.58 testis:3.63 heart:1.54 muscle:2.91 esophagus:- stomach:- intestine:- colon:1.56     liver/hepato:2.45        lung:1.84    bladder:- kidney:2.59 pituitary:- thyroid/parathyroid:3.12 adrenal gland:2.89 pancreas:- breast:2.10 salivary:-

Gene Information

IDs

Refseq ID NM_024083
Gene ID 79058
Unigene ID Hs.298351
Probe set ID 218908_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000169696
GTEx ID ENSG00000169696

Orthologous Gene

Mouse[3]  NM_001164224, NM_026877, NM_198223
Rat[3]  NM_001164224, NM_026877, NM_198223

Chromosomal Region

17q25.3  [79,935,426  -  79,975,280]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10506710
11244503
11358836
11438465
12477932
14562105
14702039
15489334
16196087
17081983
18176180
18775313
19953087
20416077
21139048
21279521
21832049
21835426
21900206
21906983
21963094
22207755
22337587
22350894
22379092
22863883
23288701
23349634
23383273
24457600
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0042593  glucose homeostasis
GO:0006886  intracellular protein transport
GO:0016044  membrane organization
GO:0046324  regulation of glucose import

Cellular Component

GO:0005575  cellular_component
GO:0005829  cytosol
GO:0019898  extrinsic to membrane
GO:0009898  internal side of plasma membrane
GO:0005634  nucleus
GO:0048471  perinuclear region of cytoplasm
GO:0012506  vesicle membrane

Molecular Function

GO:0003674  molecular_function
GO:0005515  protein binding