calicin

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Synonym

Calicin, calicin, CCIN

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.80 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:4.74 cerebellum:4.83 brain stem:4.84 corpus callosum/glia:4.65 pineal gland:- peripheral nerve:4.34 spine:4.45 retina:- eye:- artery/aorta:4.68 vein:5.10 lymphnode:4.56 peripheral blood:- spleen:4.38 thymus:4.54 bone marrow:4.76 adipose:4.66 bone:- skin:4.88
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.16 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.14 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:11.30 ovary:- testis:748.50 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.75 placenta:4.55 prostate:4.51 ovary:4.71 testis:8.19 heart:4.77 muscle:5.18 esophagus:4.77 stomach:4.53 intestine:4.80 colon:4.97 liver/hepato:4.53 lung:4.58 bladder:- kidney:4.69 pituitary:4.53 thyroid/parathyroid:4.53 adrenal gland:4.69 pancreas:5.37 breast:4.62 salivary:4.69
CAGE uterus:0 placenta:0 prostate:0 ovary:0 testis:4.57 heart:0 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.14 ovary:0.18 testis:5.00 heart:0.06 muscle:0 esophagus:- stomach:- intestine:- colon:0.04     liver/hepato:0        lung:0.10    bladder:- kidney:0.02 pituitary:- thyroid/parathyroid:0.01 adrenal gland:0.24 pancreas:- breast:0.07 salivary:-

Gene Information

IDs

Refseq ID NM_005893
Gene ID 881
Unigene ID Hs.115460
Probe set ID 210642_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000185972
GTEx ID ENSG00000185972

Orthologous Gene

Mouse[1]  NM_001002787
Rat[1]  NM_001005904

Chromosomal Region

9p13.3  [36,169,389  -  36,171,329]

Gene Family (Interpro ID)

IPR011333  BTB/POZ fold
IPR000210  BTB/POZ-like

Link to Pubmed  (Pubmed ID)

7641791
11090452
12477932
21832049

Gene Ontology  (GO ID)

Biological Process

GO:0030154  cell differentiation
GO:0007275  multicellular organismal development
GO:0007283  spermatogenesis

Cellular Component

GO:0033150  cytoskeletal calyx
GO:0005856  cytoskeleton

Molecular Function

GO:0005200  structural constituent of cytoskeleton