chromosome 19 open reading frame 40

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Synonym

chromosome 19 open reading frame 40, FLJ46828, MGC32020, C19orf40

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:5.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:5.90 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:5.66 cerebellum:6.01 brain stem:5.56 corpus callosum/glia:5.78 pineal gland:- peripheral nerve:5.38 spine:5.53 retina:- eye:- artery/aorta:5.69 vein:5.87 lymphnode:5.94 peripheral blood:- spleen:5.77 thymus:6.09 bone marrow:5.77 adipose:5.52 bone:- skin:5.92
CAGE cerebrum:0.42 cerebellum:- brain stem:0.68 corpus callosum/glia:0.63 pineal gland:0.47 peripheral nerve:- spine:0.73 retina:- eye:- artery/aorta:0 vein:1.10 lymphnode:1.04 peripheral blood:- spleen:1.15 thymus:1.29 bone marrow:- adipose:0.78 bone:- skin:-
RNA-seq cerebrum:0.18 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.63 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.74 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:- prostate:11.30 ovary:- testis:13 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:10.60        lung:9.80    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:5.77 placenta:5.40 prostate:5.50 ovary:5.88 testis:6.41 heart:5.78 muscle:5.76 esophagus:5.85 stomach:5.71 intestine:5.75 colon:5.84 liver/hepato:5.80 lung:5.83 bladder:- kidney:5.66 pituitary:5.46 thyroid/parathyroid:5.55 adrenal gland:5.80 pancreas:5.43 breast:5.81 salivary:5.85
CAGE uterus:0.75 placenta:1.14 prostate:0.62 ovary:0.72 testis:2.08 heart:0.36 muscle:0.13 esophagus:1.04 stomach:- intestine:1.02 colon:0.89     liver/hepato:0.55    lung:0.31 bladder:0.53 kidney:0.92 pituitary:0.10 thyroid/parathyroid:0.53 adrenal gland:- pancreas:0.58 breast:0.55 salivary:0.83
RNA-seq uterus:- placenta:- prostate:0.76 ovary:0.76 testis:2.10 heart:0.32 muscle:0.11 esophagus:- stomach:- intestine:- colon:0.53     liver/hepato:0.19        lung:0.12    bladder:- kidney:0.40 pituitary:- thyroid/parathyroid:0.72 adrenal gland:1.18 pancreas:- breast:0.84 salivary:-

Gene Information

IDs

Refseq ID NM_152266
Gene ID 91442
Unigene ID Hs.579899
Probe set ID 214816_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000131944
GTEx ID ENSG00000131944

Orthologous Gene

Mouse[1]  NM_178643
Rat[1]  NM_001109335

Chromosomal Region

19q13.11  [33,463,148  -  33,467,946]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
15489334
16344560
17207965
17289582
18029348
18174376
18206976
18285517
18995830
20064461
20347428
20347429
20670894
21832049
22705371
23333308
23741361
23932590
23999858
24003026

Gene Ontology  (GO ID)

Biological Process

GO:0006281  DNA repair

Cellular Component

GO:0043240  Fanconi anaemia nuclear complex
GO:0043231  intracellular membrane-bounded organelle
GO:0005730  nucleolus
GO:0005654  nucleoplasm
GO:0005634  nucleus

Molecular Function

GO:0003682  chromatin binding
GO:0003677  DNA binding
GO:0005515  protein binding