ribonucleic acid binding protein S1

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Synonym

Rnps1, ribonucleic acid binding protein S1, RNA-binding protein with serine-rich domain 1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:211.90 cerebellum:73.70 brain stem:127.10 corpus callosum/glia:- pineal gland:- peripheral nerve:191.10 spine:141.90 retina:128.60 eye:182.40 artery/aorta:- vein:- lymphnode:324 peripheral blood:143.80 spleen:329.20 thymus:88.90 bone marrow:359 adipose:- bone:200.40 skin:55.40
GeneChip cerebrum:10.55 cerebellum:10.58 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:9.91 spine:9.56 retina:10.56 eye:10.42 artery/aorta:- vein:10.65 lymphnode:10.70 peripheral blood:- spleen:10.65 thymus:- bone marrow:10.89 adipose:9.84 bone:10.94 skin:10.66
CAGE cerebrum:3.87 cerebellum:- brain stem:3.92 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:3.79 retina:- eye:- artery/aorta:3.70 vein:- lymphnode:4.25 peripheral blood:- spleen:3.97 thymus:4.08 bone marrow:- adipose:- bone:3.96 skin:3.80
RNA-seq cerebrum:24.53 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:87.20 placenta:69 prostate:30.90 ovary:183.90 testis:59.10 heart:241.80 muscle:71 esophagus:- stomach:163.60 intestine:- colon:176.20     liver/hepato:72.40        lung:90.40    bladder:- kidney:24.20 pituitary:297.10 thyroid/parathyroid:- adrenal gland:424.40 pancreas:18.80 breast:78.40 salivary:54
GeneChip uterus:10.53 placenta:10.50 prostate:10.30 ovary:10.52 testis:9.47 heart:9.17 muscle:9.61 esophagus:- stomach:9.88 intestine:10.08 colon:- liver/hepato:8.56 lung:9.64 bladder:10.15 kidney:8.76 pituitary:10.34 thyroid/parathyroid:- adrenal gland:10.42 pancreas:9.46 breast:10.25 salivary:9.47
CAGE uterus:3.88 placenta:3.97 prostate:3.45 ovary:3.63 testis:4.36 heart:- muscle:- esophagus:- stomach:3.85 intestine:3.09 colon:3.78     liver/hepato:3.39    lung:3.52 bladder:3.57 kidney:- pituitary:3.80 thyroid/parathyroid:- adrenal gland:3.49 pancreas:3.74 breast:3.72 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:10.61 esophagus:- stomach:- intestine:- colon:-     liver/hepato:5.78        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001080127
Gene ID 19826
Unigene ID Mm.1951
Probe set ID 1437027_x_at  [Mouse430_2]
Ensembl ID ENSMUSG00000034681

Orthologous Gene

Human[4]  NM_006711, NM_080594
Rat[1]  NM_001011890, NM_080594

Chromosomal Region

-

Gene Family (Interpro ID)

IPR000504  RNA recognition motif, RNP-1

Link to Pubmed  (Pubmed ID)

7589244
8241277
8617202
10349636
10922068
11042159
11076861
11125038
11217851
12466851
12477932
12520002
12904583
14610273
14681479
15489334
15782199
16033648
16141072
16141073
17967808
18799693
19403727
20211142
22922362
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0000184  nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0008380  RNA splicing

Cellular Component

GO:0005737  cytoplasm
GO:0005634  nucleus

Molecular Function

GO:0003677  DNA binding
GO:0003730  mRNA 3'-UTR binding
GO:0003676  nucleic acid binding
GO:0000166  nucleotide binding
GO:0003723  RNA binding