speckle-type POZ protein

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Synonym

Speckle-type POZ protein, speckle-type POZ protein, PDX-1 C-terminal-interacting factor 1, Spop, PCIF1, AI315626, Pcif1, TEF2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:67.70 cerebellum:73.70 brain stem:95.30 corpus callosum/glia:- pineal gland:515.60 peripheral nerve:57.30 spine:- retina:- eye:15.20 artery/aorta:- vein:- lymphnode:21.60 peripheral blood:- spleen:79 thymus:88.90 bone marrow:12.80 adipose:- bone:- skin:55.40
GeneChip cerebrum:10.91 cerebellum:11.61 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:10.69 spine:10.52 retina:10.20 eye:9.98 artery/aorta:- vein:10.59 lymphnode:10.95 peripheral blood:- spleen:10.78 thymus:- bone marrow:11.13 adipose:10.55 bone:10.98 skin:11.08
CAGE cerebrum:4.82 cerebellum:- brain stem:4.49 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.54 retina:- eye:- artery/aorta:4.60 vein:- lymphnode:4.46 peripheral blood:- spleen:4.13 thymus:3.98 bone marrow:- adipose:- bone:4.39 skin:5.06
RNA-seq cerebrum:19.07 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:43.60 placenta:55.20 prostate:30.90 ovary:46 testis:29.60 heart:93 muscle:35.50 esophagus:- stomach:98.20 intestine:110.90 colon:282     liver/hepato:9.10        lung:30.10    bladder:66.20 kidney:64.50 pituitary:12.90 thyroid/parathyroid:- adrenal gland:- pancreas:28.10 breast:45.70 salivary:54
GeneChip uterus:10.64 placenta:9.84 prostate:11.37 ovary:10.51 testis:8.35 heart:11.03 muscle:11.69 esophagus:- stomach:10.38 intestine:10.32 colon:- liver/hepato:10.58 lung:11.44 bladder:11.21 kidney:10.22 pituitary:10.44 thyroid/parathyroid:- adrenal gland:11.11 pancreas:10.52 breast:10.89 salivary:10.91
CAGE uterus:4.27 placenta:3.88 prostate:4.92 ovary:4.19 testis:3.63 heart:- muscle:- esophagus:- stomach:4.46 intestine:3.86 colon:3.78     liver/hepato:4.48    lung:4.90 bladder:4.58 kidney:- pituitary:4.40 thyroid/parathyroid:- adrenal gland:4.71 pancreas:4.71 breast:4.20 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:26.65 esophagus:- stomach:- intestine:- colon:-     liver/hepato:9.76        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_025287
Gene ID 20747
Unigene ID Mm.395285
Probe set ID 1416524_at  [Mouse430_2]
Ensembl ID ENSMUSG00000057522

Orthologous Gene

Human[12]  NM_001007226, NM_001007227, NM_001007228, NM_001007229, NM_001007230, NM_003563
Rat[4]  NM_001100496, NM_001100996, NM_001100985, NM_001007229, NM_001007230, NM_003563

Chromosomal Region

-

Gene Family (Interpro ID)

IPR011333  BTB/POZ fold
IPR000210  BTB/POZ-like
IPR002083  MATH
IPR008974  TRAF-like

Link to Pubmed  (Pubmed ID)

8889548
9806826
10349636
10922068
11042159
11076861
11217851
12183056
12205107
12466851
12477932
12520002
12819136
14610273
15121856
15489334
15782199
16141072
16141073
16740475
17126328
17363568
18799693
19684112
19955409
20399258
20463034
20679732
20811152
21267068
21677750
24072710

Gene Ontology  (GO ID)

Biological Process

GO:0043161  proteasomal ubiquitin-dependent protein catabolic process
GO:0042787  protein ubiquitination during ubiquitin-dependent protein catabolic process

Cellular Component

GO:0031463  Cul3-RING ubiquitin ligase complex
GO:0016607  nuclear speck
GO:0005634  nucleus

Molecular Function

GO:0031625  ubiquitin protein ligase binding