suppressor of Ty 5 homolog (S. cerevisiae)

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Synonym

AL033321, DRB sensitivity-inducing factor large subunit, Transcription elongation factor SPT5, suppressor of Ty 5 homolog (S. cerevisiae), Supt5h, DSIF large subunit, AL033283, AU019549

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:10.03 cerebellum:10.20 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:10.36 spine:9.93 retina:8.97 eye:9.34 artery/aorta:- vein:9.48 lymphnode:10.51 peripheral blood:- spleen:10.57 thymus:- bone marrow:9.96 adipose:9.74 bone:9.44 skin:9.64
CAGE cerebrum:4.92 cerebellum:- brain stem:4.76 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.88 retina:- eye:- artery/aorta:4.70 vein:- lymphnode:5.37 peripheral blood:- spleen:4.54 thymus:4.80 bone marrow:- adipose:- bone:4.42 skin:5.61
RNA-seq cerebrum:19.49 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:10.28 placenta:10.69 prostate:10.57 ovary:10.33 testis:10.44 heart:9.58 muscle:9.64 esophagus:- stomach:9.54 intestine:9.71 colon:- liver/hepato:9.57 lung:9.98 bladder:9.95 kidney:9.48 pituitary:10.31 thyroid/parathyroid:- adrenal gland:10.94 pancreas:9.65 breast:9.94 salivary:10.18
CAGE uterus:4.56 placenta:4.92 prostate:5.02 ovary:4.51 testis:5.96 heart:- muscle:- esophagus:- stomach:4.54 intestine:4.51 colon:4.40     liver/hepato:4.17    lung:4.63 bladder:4.61 kidney:- pituitary:4.67 thyroid/parathyroid:- adrenal gland:4.81 pancreas:5.62 breast:4.49 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:8.59 esophagus:- stomach:- intestine:- colon:-     liver/hepato:9.38        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_013676
Gene ID 20924
Unigene ID -
Probe set ID 1424255_at  [Mouse430_2]
Ensembl ID ENSMUSG00000003435

Orthologous Gene

Human[4]  NM_001111020, NM_001130824, NM_001130825, NM_003169
Rat[4]  NM_001111020, NM_001130824, NM_001130825, NM_003169

Chromosomal Region

-

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7671812
9480761
9662403
10349636
10725249
10922068
11042159
11076861
11217851
12466851
12477932
12520002
14610273
15489334
15618518
15782199
16141072
16141073
16169070
18287559
18799693
20059953
20211142
20231280
20737593
20887897
21267068
21670248
21677750
22570620
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0032785  negative regulation of RNA elongation
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0016239  positive regulation of macroautophagy
GO:0032786  positive regulation of RNA elongation
GO:0045944  positive regulation of transcription from RNA polymerase II promoter
GO:0032784  regulation of RNA elongation
GO:0006357  regulation of transcription from RNA polymerase II promoter
GO:0006355  regulation of transcription, DNA-dependent
GO:0006354  RNA elongation
GO:0006368  RNA elongation from RNA polymerase II promoter
GO:0006351  transcription, DNA-dependent

Cellular Component

GO:0032044  DSIF complex
GO:0005634  nucleus

Molecular Function

GO:0003682  chromatin binding
GO:0019899  enzyme binding
GO:0046982  protein heterodimerization activity