CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like

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Synonym

Nuclear LIM interactor-interacting factor 1, AI426263, NIF-like protein, Small C-terminal domain phosphatase 3, Ctdspl, CTD small phosphatase-like protein, Nifl, NLI-interacting factor 1, SCP3, CTDSP-like, 2810418J22Rik, Nif1, HYA22

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:26 cerebellum:55.30 brain stem:63.60 corpus callosum/glia:- pineal gland:257.80 peripheral nerve:95.50 spine:47.30 retina:- eye:30.40 artery/aorta:- vein:- lymphnode:43.20 peripheral blood:14.40 spleen:13.20 thymus:49.40 bone marrow:12.80 adipose:212.70 bone:37.60 skin:55.40
GeneChip cerebrum:7.97 cerebellum:6.80 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:7.71 spine:7.55 retina:8.27 eye:8.60 artery/aorta:- vein:8.40 lymphnode:6.98 peripheral blood:- spleen:7.29 thymus:- bone marrow:7.68 adipose:8.83 bone:8 skin:8.66
CAGE cerebrum:2.34 cerebellum:- brain stem:2.43 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:2.68 retina:- eye:- artery/aorta:3.92 vein:- lymphnode:0.94 peripheral blood:- spleen:2.22 thymus:1.99 bone marrow:- adipose:- bone:2.77 skin:3.54
RNA-seq cerebrum:3.12 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:55.20 prostate:- ovary:11.50 testis:29.60 heart:- muscle:35.50 esophagus:- stomach:- intestine:- colon:88.10     liver/hepato:9.10        lung:170.70    bladder:- kidney:129 pituitary:25.80 thyroid/parathyroid:112.50 adrenal gland:- pancreas:- breast:62 salivary:54
GeneChip uterus:8.16 placenta:9.33 prostate:9.88 ovary:8.62 testis:7.43 heart:7.19 muscle:7.39 esophagus:- stomach:8.95 intestine:9.20 colon:- liver/hepato:7.10 lung:10.32 bladder:8.47 kidney:9.38 pituitary:8.96 thyroid/parathyroid:- adrenal gland:8.51 pancreas:8.81 breast:8.41 salivary:8.61
CAGE uterus:2.79 placenta:4.24 prostate:2.74 ovary:3.32 testis:2.41 heart:- muscle:- esophagus:- stomach:3.09 intestine:2.97 colon:3.48     liver/hepato:2.29    lung:4.39 bladder:3.42 kidney:- pituitary:3.29 thyroid/parathyroid:- adrenal gland:3.28 pancreas:3.53 breast:3.14 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.43 esophagus:- stomach:- intestine:- colon:-     liver/hepato:1.54        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_133710
Gene ID 69274
Unigene ID Mm.439928
Probe set ID 1422510_at  [Mouse430_2]
Ensembl ID ENSMUSG00000047409

Orthologous Gene

Human[6]  NM_001008392, NM_005808
Rat[1]  NM_001106865, NM_005808

Chromosomal Region

-

Gene Family (Interpro ID)

IPR011948  Dullard-like phosphatase domain
IPR004274  NLI interacting factor

Link to Pubmed  (Pubmed ID)

10349636
11042159
11076861
11217851
12466851
12477932
14610273
15782199
16141072
16141073
16806845
17369397
21267068
22210897

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process

Cellular Component

GO:0005575  cellular_component
GO:0005634  nucleus

Molecular Function

GO:0016787  hydrolase activity
GO:0046872  metal ion binding
GO:0003674  molecular_function
GO:0016791  phosphatase activity
GO:0004721  phosphoprotein phosphatase activity