sushi domain containing 2

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Synonym

sushi domain containing 2, Sushi domain-containing protein 2 precursor, Susd2, 1200011D11Rik

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:17.40 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:19.10 spine:283.70 retina:32.10 eye:- artery/aorta:84.40 vein:- lymphnode:- peripheral blood:14.40 spleen:223.80 thymus:39.50 bone marrow:- adipose:- bone:- skin:174.20
GeneChip cerebrum:6.68 cerebellum:5.95 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:11.70 spine:9.23 retina:6.12 eye:7.36 artery/aorta:- vein:11.19 lymphnode:7.33 peripheral blood:- spleen:7.01 thymus:- bone marrow:5.89 adipose:6.37 bone:6.06 skin:11.58
CAGE cerebrum:1.44 cerebellum:- brain stem:3.32 corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:4.37 retina:- eye:- artery/aorta:2.80 vein:- lymphnode:3.23 peripheral blood:- spleen:2.93 thymus:1.80 bone marrow:- adipose:- bone:2.77 skin:5.37
RNA-seq cerebrum:2.98 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:13.80 prostate:- ovary:- testis:36.90 heart:74.40 muscle:106.50 esophagus:- stomach:- intestine:- colon:17.60     liver/hepato:9.10        lung:70.30    bladder:66.20 kidney:322.40 pituitary:51.70 thyroid/parathyroid:337.40 adrenal gland:- pancreas:- breast:3.30 salivary:162
GeneChip uterus:7.40 placenta:7.48 prostate:9.58 ovary:6.81 testis:5.93 heart:6.02 muscle:6.28 esophagus:- stomach:7.57 intestine:8.07 colon:- liver/hepato:6.07 lung:6.74 bladder:8.96 kidney:11.27 pituitary:6.74 thyroid/parathyroid:- adrenal gland:7.55 pancreas:7.82 breast:6.42 salivary:8.82
CAGE uterus:3.27 placenta:2.99 prostate:3.31 ovary:2.78 testis:0.45 heart:- muscle:- esophagus:- stomach:3.29 intestine:5.87 colon:4.83     liver/hepato:1.94    lung:2.86 bladder:4.49 kidney:- pituitary:2.50 thyroid/parathyroid:- adrenal gland:3.28 pancreas:3.53 breast:1.88 salivary:-
RNA-seq uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:1.28 esophagus:- stomach:- intestine:- colon:-     liver/hepato:1.46        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-

Gene Information

IDs

Refseq ID NM_001162913
Gene ID 71733
Unigene ID Mm.247956
Probe set ID 1426511_at  [Mouse430_2]
Ensembl ID ENSMUSG00000006342

Orthologous Gene

Human[1]  NM_019601
Rat[1]  NM_001106381

Chromosomal Region

10C1  [75,099,364  -  75,106,753]

Gene Family (Interpro ID)

IPR001212  Somatomedin B
IPR000436  Sushi/SCR/CCP

Link to Pubmed  (Pubmed ID)

8889548
10349636
11042159
11076861
11125038
11217851
12466851
12477932
15489334
16141072
16141073
16602821
18287559
20096683
21267068
21386911
21677750

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0006955  immune response

Cellular Component

GO:0005575  cellular_component
GO:0016021  integral to membrane
GO:0016020  membrane

Molecular Function

GO:0003674  molecular_function
GO:0030247  polysaccharide binding
GO:0005044  scavenger receptor activity