collagen, type VIII, alpha 1

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Synonym

-

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:47.90 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:1177
GeneChip nodata
CAGE nodata
RNA-seq nodata
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:39.80 prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:59.20 thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip nodata
CAGE nodata
RNA-seq nodata

Gene Information

IDs

Refseq ID NM_001107100
Gene ID 304021
Unigene ID Rn.53843
Probe set ID -
Ensembl ID ENSRNOG00000039668

Orthologous Gene

Human[2]  NM_001850, NM_020351
Mouse[4]  NM_007739, NM_020351

Chromosomal Region

11q12  [43,604,994  -  43,733,870]

Gene Family (Interpro ID)

IPR000276  7TM GPCR, rhodopsin-like
IPR002233  Adrenergic receptor
IPR000681  Adrenergic receptor, beta 3
IPR017452  GPCR, rhodopsin-like superfamily
IPR008983  Tumour necrosis factor-like

Link to Pubmed  (Pubmed ID)

19168440

Gene Ontology  (GO ID)

Biological Process

GO:0048593  camera-type eye morphogenesis
GO:0050673  epithelial cell proliferation
GO:0010811  positive regulation of cell-substrate adhesion

Cellular Component

GO:0005581  collagen
GO:0031012  extracellular matrix