frequently rearranged in advanced T-cell lymphomas

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Synonym

Frat-1, FRAT1, frequently rearranged in advanced T-cell lymphomas, Proto-oncogene FRAT1, Frequently rearranged in advanced T-cell lymphomas

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:1.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:37.80 thymus:- bone marrow:19.70 adipose:- bone:- skin:-
GeneChip cerebrum:5.28 cerebellum:5.70 brain stem:5.20 corpus callosum/glia:5.35 pineal gland:- peripheral nerve:5.08 spine:5.29 retina:- eye:- artery/aorta:5.23 vein:5.05 lymphnode:5.81 peripheral blood:- spleen:6.25 thymus:5.87 bone marrow:6.36 adipose:5.39 bone:- skin:5.58
CAGE cerebrum:1.19 cerebellum:- brain stem:1.33 corpus callosum/glia:1.19 pineal gland:1.14 peripheral nerve:- spine:1.07 retina:- eye:- artery/aorta:0.79 vein:1.44 lymphnode:1.92 peripheral blood:- spleen:2.31 thymus:1.92 bone marrow:- adipose:1.16 bone:- skin:-
RNA-seq cerebrum:1.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.18 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.96 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:7.30 prostate:11.30 ovary:- testis:13 heart:- muscle:- esophagus:- stomach:- intestine:- colon:8.50     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip uterus:5.08 placenta:5.85 prostate:5.85 ovary:5.31 testis:5.39 heart:5.30 muscle:5.62 esophagus:5.30 stomach:5.60 intestine:5.75 colon:5.76 liver/hepato:6.26 lung:5.42 bladder:- kidney:5.16 pituitary:5.42 thyroid/parathyroid:5.67 adrenal gland:5.58 pancreas:5.27 breast:5.76 salivary:5.76
CAGE uterus:0.98 placenta:1.63 prostate:1.32 ovary:0.79 testis:2.84 heart:0.91 muscle:1.11 esophagus:1.31 stomach:- intestine:2.00 colon:1.84     liver/hepato:1.54    lung:1.81 bladder:0.98 kidney:1.06 pituitary:0.71 thyroid/parathyroid:1.00 adrenal gland:- pancreas:1.59 breast:0.90 salivary:1.58
RNA-seq uterus:- placenta:- prostate:1.16 ovary:0.88 testis:1.39 heart:0.82 muscle:0.58 esophagus:- stomach:- intestine:- colon:0.80     liver/hepato:1.39        lung:0.88    bladder:- kidney:0.86 pituitary:- thyroid/parathyroid:1.49 adrenal gland:1.72 pancreas:- breast:1.24 salivary:-

Gene Information

IDs

Refseq ID NM_005479
Gene ID 10023
Unigene ID Hs.126057
Probe set ID 219889_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000165879
GTEx ID ENSG00000165879

Orthologous Gene

Mouse[2]  NM_013788
Rat [0]  

Chromosomal Region

10q24.1  [99,079,022  -  99,081,672]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9034327
10428961
11445844
11738041
11894125
12095675
12477932
12556519
12805274
15164054
15489334
16385451
16479254
16982607
18498136
20041315
20096670
21818639
21988832
22528942
23455922
23602568
23613813

Gene Ontology  (GO ID)

Biological Process

GO:0000578  embryonic axis specification
GO:0016055  Wnt receptor signaling pathway

Cellular Component

GO:0005737  cytoplasm