cadherin 7, type 2

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Synonym

CDH7L1, CDH7, Cadherin-7 precursor, cadherin 7, type 2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:4.90 cerebellum:5.53 brain stem:5.50 corpus callosum/glia:4.08 pineal gland:- peripheral nerve:5.62 spine:4.44 retina:- eye:- artery/aorta:4.34 vein:4.41 lymphnode:4.01 peripheral blood:- spleen:3.85 thymus:4.40 bone marrow:4.62 adipose:4.40 bone:- skin:4.54
CAGE cerebrum:1.32 cerebellum:- brain stem:1.59 corpus callosum/glia:0 pineal gland:0.62 peripheral nerve:- spine:0.58 retina:- eye:- artery/aorta:0.34 vein:0.18 lymphnode:0 peripheral blood:- spleen:0 thymus:0.57 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.89 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.02 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:4.05 placenta:3.93 prostate:4.47 ovary:3.91 testis:4.30 heart:4.14 muscle:4.71 esophagus:4.02 stomach:3.89 intestine:4.27 colon:4.33 liver/hepato:4.38 lung:4.06 bladder:- kidney:4.19 pituitary:4.51 thyroid/parathyroid:4 adrenal gland:4.21 pancreas:4.59 breast:4.04 salivary:4.29
CAGE uterus:0.09 placenta:0 prostate:0.27 ovary:0.14 testis:0.43 heart:0 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0.05 bladder:0.09 kidney:0 pituitary:0.19 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.12 ovary:0.05 testis:0.00 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0 adrenal gland:0 pancreas:- breast:0.03 salivary:-

Gene Information

IDs

Refseq ID NM_033646
Gene ID 1005
Unigene ID -
Probe set ID 220679_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000081138
GTEx ID ENSG00000081138

Orthologous Gene

Mouse[1]  NM_172853
Rat[1]  NM_001012737

Chromosomal Region

18q22.1  [63,417,488  -  63,552,376]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like

Link to Pubmed  (Pubmed ID)

7806582
9219219
9615235
10861224
10995570
12477932
15273735
19200257
20379614
21378379
21988832
23247143
24025145

Gene Ontology  (GO ID)

Biological Process

GO:0034332  adherens junction organization
GO:0034329  cell junction assembly
GO:0016337  cell-cell adhesion
GO:0045216  cell-cell junction organization
GO:0007156  homophilic cell adhesion

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005509  calcium ion binding