RNA terminal phosphate cyclase-like 1

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Synonym

RPC2, HSPC338, RTC2, RNA 3'-terminal phosphate cyclase-like protein, RNA terminal phosphate cyclase-like 1, RCL1, RPCL1, RNAC

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:29.60 cerebellum:25.20 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:61.30 spine:- retina:- eye:- artery/aorta:30 vein:- lymphnode:30.30 peripheral blood:182.20 spleen:56.70 thymus:- bone marrow:137.80 adipose:- bone:38.40 skin:52.80
GeneChip cerebrum:5.86 cerebellum:5.69 brain stem:6.03 corpus callosum/glia:5.95 pineal gland:- peripheral nerve:5.98 spine:6.14 retina:- eye:- artery/aorta:6.43 vein:6.09 lymphnode:6.35 peripheral blood:- spleen:6.02 thymus:6.23 bone marrow:6.76 adipose:6.37 bone:- skin:6.47
CAGE cerebrum:2.84 cerebellum:- brain stem:2.92 corpus callosum/glia:3.03 pineal gland:2.82 peripheral nerve:- spine:3.23 retina:- eye:- artery/aorta:3.64 vein:3.12 lymphnode:3.21 peripheral blood:- spleen:2.68 thymus:2.74 bone marrow:- adipose:3.42 bone:- skin:-
RNA-seq cerebrum:2.02 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.59 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.07 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:72.90 placenta:29.10 prostate:- ovary:37.30 testis:38.90 heart:12.80 muscle:- esophagus:- stomach:- intestine:64.80 colon:25.40     liver/hepato:84.40        lung:-    bladder:- kidney:52 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:26.70 breast:- salivary:-
GeneChip uterus:6.24 placenta:5.74 prostate:6.30 ovary:6.45 testis:6.27 heart:6.04 muscle:6.44 esophagus:6.01 stomach:6 intestine:6.02 colon:6.03 liver/hepato:7.43 lung:6.24 bladder:- kidney:6.28 pituitary:6.14 thyroid/parathyroid:6.26 adrenal gland:6.35 pancreas:6.49 breast:6.34 salivary:6.11
CAGE uterus:2.97 placenta:2.68 prostate:2.54 ovary:3.03 testis:2.72 heart:2.69 muscle:3.36 esophagus:2.55 stomach:- intestine:2.11 colon:2.96     liver/hepato:4.38    lung:3.09 bladder:2.63 kidney:2.73 pituitary:2.77 thyroid/parathyroid:2.41 adrenal gland:- pancreas:4.47 breast:3.67 salivary:2.26
RNA-seq uterus:- placenta:- prostate:2.76 ovary:2.69 testis:2.88 heart:1.70 muscle:1.80 esophagus:- stomach:- intestine:- colon:2.25     liver/hepato:4.85        lung:2.76    bladder:- kidney:2.77 pituitary:- thyroid/parathyroid:3.10 adrenal gland:3.66 pancreas:- breast:2.81 salivary:-

Gene Information

IDs

Refseq ID NM_005772
Gene ID 10171
Unigene ID Hs.194121
Probe set ID 218544_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000120158
GTEx ID ENSG00000120158

Orthologous Gene

Mouse[1]  NM_021525
Rat[1]  NM_001013152

Chromosomal Region

9p24.1  [4,792,869  -  4,861,064]

Gene Family (Interpro ID)

IPR000228  RNA 3'-terminal phosphate cyclase-like
IPR016443  RNA 3'-terminal phosphate cyclase-like, eukaryotic

Link to Pubmed  (Pubmed ID)

3416880
8125298
9184239
10790377
11042152
11790298
12477932
14702039
15164053
15489334
15635413
16344560
19862010
20139978
20379614
21139048
21906983
21907836
21963094
22139419
22586326
23222517
23263863
24026423
24163370
24457600

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process
GO:0042254  ribosome biogenesis
GO:0006396  RNA processing

Cellular Component

GO:0005730  nucleolus

Molecular Function

GO:0003963  RNA-3'-phosphate cyclase activity