PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)

Synonym

Pre-mRNA-processing-splicing factor 8, PRP8, Splicing factor Prp8, PRPF8, HPRP8, 220 kDa U5 snRNP-specific protein, PRP8 homolog, PRPC8, RP13, p220

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:119.70

cerebellum:151.10

brain stem:-

corpus callosum/glia:58.30

pineal gland:148.30

peripheral nerve:184

spine:336.90

retina:237.30

eye:235.10

artery/aorta:60

vein:733.10

lymphnode:171.90

peripheral blood:72.90

spleen:94.50

thymus:116

bone marrow:334.60

adipose:40.30

bone:76.80

skin:326.40

GeneChip

cerebrum:8.08

cerebellum:8.70

brain stem:8.14

corpus callosum/glia:8.08

pineal gland:-

peripheral nerve:8.36

spine:7.96

retina:-

eye:-

artery/aorta:8.35

vein:7.93

lymphnode:8.70

peripheral blood:-

spleen:8.62

thymus:8.86

bone marrow:8.21

adipose:8.45

bone:-

skin:8.69

CAGE

cerebrum:4.13

cerebellum:-

brain stem:4.36

corpus callosum/glia:4.65

pineal gland:4.75

peripheral nerve:-

spine:4.04

retina:-

eye:-

artery/aorta:4.54

vein:4.17

lymphnode:4.58

peripheral blood:-

spleen:4.44

thymus:5.02

bone marrow:-

adipose:4.49

bone:-

skin:-

RNA-seq

cerebrum:4.60

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:5.10

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.18

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:91.10

placenta:160.30

prostate:259.10

ovary:559

testis:151.40

heart:114.90

muscle:80.40

esophagus:-

stomach:552.30

intestine:32.40

colon:347.70

liver/hepato:84.40

lung:83.10

bladder:-

kidney:41.60

pituitary:116

thyroid/parathyroid:-

adrenal gland:101.60

pancreas:142.30

breast:650.50

salivary:-

GeneChip

uterus:8.76

placenta:8.20

prostate:8.91

ovary:9.14

testis:9.26

heart:8.11

muscle:8.64

esophagus:8.68

stomach:8.21

intestine:8.16

colon:8.37

liver/hepato:7.89

lung:8.53

bladder:-

kidney:8.17

pituitary:9.15

thyroid/parathyroid:8.70

adrenal gland:8.72

pancreas:7.91

breast:8.88

salivary:8.16

CAGE

uterus:4.65

placenta:4.41

prostate:4.55

ovary:4.89

testis:4.90

heart:4.39

muscle:4.37

esophagus:4.47

stomach:-

intestine:4.35

colon:4.29

liver/hepato:4.44

lung:4.38

bladder:4.54

kidney:4.07

pituitary:4.52

thyroid/parathyroid:4.42

adrenal gland:-

pancreas:4.13

breast:4.14

salivary:4.65

RNA-seq

uterus:-

placenta:-

prostate:5.44

ovary:5.79

testis:5.49

heart:4.45

muscle:6.11

esophagus:-

stomach:-

intestine:-

colon:4.76

liver/hepato:3.91

lung:4.96

bladder:-

kidney:4.62

pituitary:-

thyroid/parathyroid:5.33

adrenal gland:4.92

pancreas:-

breast:4.43

salivary:-

IDs

Refseq ID	NM_006445
Gene ID	10594
Unigene ID	Hs.181368
Probe set ID	200000_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000174231
GTEx ID	ENSG00000174231

Orthologous Gene

Mouse[1]	NM_138659
Rat [0]

Chromosomal Region

17p13.3 [1,553,923 - 1,588,154]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0010467	gene expression
GO:0006397	mRNA processing
GO:0000398	nuclear mRNA splicing, via spliceosome
GO:0008380	RNA splicing
GO:0000375	RNA splicing, via transesterification reactions

Cellular Component

GO:0071013	catalytic step 2 spliceosome
GO:0016607	nuclear speck
GO:0005654	nucleoplasm
GO:0005682	U5 snRNP

Molecular Function

GO:0005515	protein binding
GO:0030623	U5 snRNA binding
GO:0017070	U6 snRNA binding

PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function