chemokine (C-C motif) ligand 27

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Synonym

chemokine (C-C motif) ligand 27, SCYA27, ESkine, ILC, CTAK, CC chemokine ILC, Small inducible cytokine A27 precursor, PESKY, Skinkine, IL-11 R-alpha-locus chemokine, Cutaneous T-cell-attracting chemokine, ESKINE, skinkine, CCL27, CTACK

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:3.73 cerebellum:3.93 brain stem:3.75 corpus callosum/glia:3.91 pineal gland:- peripheral nerve:3.50 spine:3.60 retina:- eye:- artery/aorta:3.65 vein:3.92 lymphnode:3.68 peripheral blood:- spleen:3.58 thymus:3.60 bone marrow:3.76 adipose:3.80 bone:- skin:6.70
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0.18 lymphnode:0 peripheral blood:- spleen:0 thymus:0.80 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.10 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.38 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.83 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:3.69 placenta:3.91 prostate:3.38 ovary:3.72 testis:3.79 heart:3.83 muscle:4.07 esophagus:3.61 stomach:3.63 intestine:3.75 colon:3.74 liver/hepato:3.83 lung:3.82 bladder:- kidney:3.74 pituitary:3.66 thyroid/parathyroid:3.58 adrenal gland:3.71 pancreas:4.57 breast:4.89 salivary:4.03
CAGE uterus:0 placenta:0.24 prostate:0 ovary:0 testis:0 heart:0 muscle:0 esophagus:0 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.30 ovary:0.37 testis:0.70 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.22     liver/hepato:0        lung:0.37    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0.33 adrenal gland:0 pancreas:- breast:0.16 salivary:-

Gene Information

IDs

Refseq ID NM_006664
Gene ID 10850
Unigene ID Hs.648124
Probe set ID 207955_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000213927
GTEx ID ENSG00000213927

Orthologous Gene

Mouse[11]  NM_001164046, NM_001199959, NM_001199965, NM_001048179, NM_001164044, NM_001164045, NM_001199960, NM_001199961, NM_001199962, NM_001199963, NM_001199964, NM_001199966, NM_011336
Rat[1]  NM_001108660, NM_001199959, NM_001199965, NM_001048179, NM_001164044, NM_001164045, NM_001199960, NM_001199961, NM_001199962, NM_001199963, NM_001199964, NM_001199966, NM_011336

Chromosomal Region

9p13.3  [34,661,877  -  34,664,045]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
10556532
10559234
10588729
10725696
10725697
11821893
11821900
12133963
12477932
12642842
14767451
15335355
15466853
15598438
15679580
16433680
16675558
17581202
17703412
18025475
18240029
18266834
18453562
18577758
18772332
19074885
19258923
19460752
19639049
19913121
20503287
20628086
21707761
21993219
22017510
22526457
23670528
24037339

Gene Ontology  (GO ID)

Biological Process

GO:0007267  cell-cell signaling
GO:0006935  chemotaxis
GO:0006955  immune response

Cellular Component

GO:0005576  extracellular region
GO:0005615  extracellular space

Molecular Function

GO:0008009  chemokine activity