TRAF-type zinc finger domain containing 1

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Synonym

TRAFD1, TRAF-type zinc finger domain containing 1, FLN29

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:5.74 cerebellum:5.84 brain stem:5.77 corpus callosum/glia:6.12 pineal gland:- peripheral nerve:5.58 spine:5.97 retina:- eye:- artery/aorta:5.67 vein:5.90 lymphnode:6 peripheral blood:- spleen:5.95 thymus:5.74 bone marrow:6.08 adipose:5.75 bone:- skin:5.78
CAGE cerebrum:3.10 cerebellum:- brain stem:3.70 corpus callosum/glia:4.24 pineal gland:2.83 peripheral nerve:- spine:3.52 retina:- eye:- artery/aorta:2.93 vein:3.06 lymphnode:3.41 peripheral blood:- spleen:3.68 thymus:3.64 bone marrow:- adipose:3.27 bone:- skin:-
RNA-seq cerebrum:0.23 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.42 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.35 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:5.70 placenta:5.77 prostate:5.61 ovary:5.72 testis:6.17 heart:5.63 muscle:5.61 esophagus:6.15 stomach:5.75 intestine:5.66 colon:5.98 liver/hepato:5.68 lung:5.85 bladder:- kidney:5.52 pituitary:5.78 thyroid/parathyroid:5.65 adrenal gland:5.49 pancreas:5.50 breast:5.94 salivary:5.79
CAGE uterus:3.30 placenta:3.16 prostate:3.47 ovary:3.19 testis:3.96 heart:2.86 muscle:2.49 esophagus:3.46 stomach:- intestine:3.25 colon:3.19     liver/hepato:2.91    lung:3.34 bladder:3.56 kidney:3.03 pituitary:3.12 thyroid/parathyroid:3.02 adrenal gland:- pancreas:2.34 breast:2.59 salivary:3.27
RNA-seq uterus:- placenta:- prostate:0.43 ovary:0.32 testis:0.75 heart:0.16 muscle:0.00 esophagus:- stomach:- intestine:- colon:1.22     liver/hepato:0.07        lung:1.46    bladder:- kidney:0.13 pituitary:- thyroid/parathyroid:0.42 adrenal gland:0.22 pancreas:- breast:0.11 salivary:-

Gene Information

IDs

Refseq ID NM_001143906
Gene ID 10906
Unigene ID -
Probe set ID 202837_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000135148
GTEx ID ENSG00000135148

Orthologous Gene

Mouse[2]  NM_001163470, NM_172275
Rat[1]  NM_053760, NM_172275

Chromosomal Region

12q24.13  [112,563,305  -  112,591,407]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
12477932
15302935
15489334
16196087
16221674
16565220
16964243
17081983
17500595
17554300
18781797
18849341
19862010
21139048
21890473
21906983
21942715
21963094
21987572
22505724
23000965
23275563
23314748
23398456
23455922
23602568

Gene Ontology  (GO ID)

Biological Process

GO:0045824  negative regulation of innate immune response
GO:0034097  response to cytokine stimulus

Molecular Function

GO:0046872  metal ion binding