chromobox homolog 1 (HP1 beta homolog Drosophila )

Synonym

Modifier 1 protein, Chromobox protein homolog 1, chromobox homolog 1 (HP1 beta homolog Drosophila ), HP1 beta, CBX, p25beta, M31, CBX1, HP1-BETA, HP1Hs-beta, chromobox homolog 1 (Drosophila HP1 beta), MOD1, HP1Hsbeta, Heterochromatin protein 1 homolog beta, Heterochromatin protein p25

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:48.60

cerebellum:25.20

brain stem:-

corpus callosum/glia:145.80

pineal gland:-

peripheral nerve:184

spine:-

retina:237.30

eye:129.30

artery/aorta:89.90

vein:266.60

lymphnode:70.80

peripheral blood:54.70

spleen:-

thymus:38.70

bone marrow:-

adipose:40.30

bone:25.60

skin:100.80

GeneChip

cerebrum:7.96

cerebellum:7.98

brain stem:8.04

corpus callosum/glia:8.18

pineal gland:-

peripheral nerve:7.54

spine:8.47

retina:-

eye:-

artery/aorta:7.57

vein:7.53

lymphnode:7.09

peripheral blood:-

spleen:7.20

thymus:8.46

bone marrow:6.68

adipose:7.06

bone:-

skin:7.11

CAGE

cerebrum:4.60

cerebellum:-

brain stem:4.44

corpus callosum/glia:4.25

pineal gland:4.53

peripheral nerve:-

spine:4.94

retina:-

eye:-

artery/aorta:4.69

vein:4.17

lymphnode:3.67

peripheral blood:-

spleen:3.75

thymus:4.38

bone marrow:-

adipose:3.52

bone:-

skin:-

RNA-seq

cerebrum:5.53

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.39

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.61

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:45.60

placenta:18.20

prostate:33.80

ovary:74.50

testis:86.50

heart:421.50

muscle:40.20

esophagus:-

stomach:85

intestine:32.40

colon:8.50

liver/hepato:-

lung:132

bladder:125.60

kidney:41.60

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:88.90

breast:111.50

salivary:-

GeneChip

uterus:8.46

placenta:6.87

prostate:8.02

ovary:8.27

testis:8.88

heart:7

muscle:7.81

esophagus:7.27

stomach:7.04

intestine:7.16

colon:7.14

liver/hepato:6.12

lung:7.18

bladder:-

kidney:7.19

pituitary:7.52

thyroid/parathyroid:8

adrenal gland:6.79

pancreas:6.38

breast:7.61

salivary:6.70

CAGE

uterus:4.40

placenta:3.69

prostate:4.03

ovary:4.35

testis:4.64

heart:4.10

muscle:4.36

esophagus:3.91

stomach:-

intestine:3.23

colon:3.80

liver/hepato:3.08

lung:3.87

bladder:4.14

kidney:3.66

pituitary:4.19

thyroid/parathyroid:4.06

adrenal gland:-

pancreas:3.67

breast:4.45

salivary:3.15

RNA-seq

uterus:-

placenta:-

prostate:5.14

ovary:5.81

testis:6.01

heart:3.70

muscle:4.17

esophagus:-

stomach:-

intestine:-

colon:4.89

liver/hepato:2.47

lung:4.19

bladder:-

kidney:4.38

pituitary:-

thyroid/parathyroid:4.57

adrenal gland:4.05

pancreas:-

breast:3.98

salivary:-

IDs

Refseq ID	NM_001127228
Gene ID	10951
Unigene ID	Hs.77254
Probe set ID	201518_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000108468
GTEx ID	ENSG00000108468

Orthologous Gene

Mouse[3]	NM_007622
Rat[3]	NM_007622

Chromosomal Region

17q21.32 [46,147,414 - 46,178,883]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000953	Chromo domain
IPR017984	Chromo domain subgroup
IPR016197	Chromo domain-like
IPR008251	Chromo shadow
IPR018125	Chromo shadow, subgroup

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0045892

negative regulation of transcription, DNA-dependent

Cellular Component

GO:0005721	centromeric heterochromatin
GO:0000785	chromatin
GO:0010369	chromocenter
GO:0000775	chromosome, centromeric region
GO:0001939	female pronucleus
GO:0001940	male pronucleus
GO:0005720	nuclear heterochromatin
GO:0005654	nucleoplasm
GO:0005819	spindle

Molecular Function

GO:0003682	chromatin binding
GO:0019899	enzyme binding
GO:0042802	identical protein binding
GO:0005515	protein binding

chromobox homolog 1 (HP1 beta homolog Drosophila )

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function