chromodomain helicase DNA binding protein 3

Synonym

Mi2-ALPHA, hZFH, Mi2-alpha, Zinc-finger helicase, CHD3, Mi-2a, chromodomain helicase DNA binding protein 3, ATP-dependent helicase CHD3, CHD-3, Chromodomain helicase-DNA-binding protein 3, ZFH, Mi-2 autoantigen 240 kDa protein

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:132.70

cerebellum:75.60

brain stem:-

corpus callosum/glia:58.30

pineal gland:-

peripheral nerve:61.30

spine:224.60

retina:-

eye:135.20

artery/aorta:89.90

vein:66.60

lymphnode:151.70

peripheral blood:36.40

spleen:-

thymus:141.70

bone marrow:216.50

adipose:80.70

bone:76.80

skin:110.40

GeneChip

cerebrum:6.66

cerebellum:6.39

brain stem:6.25

corpus callosum/glia:6.20

pineal gland:-

peripheral nerve:7.23

spine:6.15

retina:-

eye:-

artery/aorta:7.07

vein:6.94

lymphnode:7.81

peripheral blood:-

spleen:7.47

thymus:7.80

bone marrow:7.06

adipose:7.07

bone:-

skin:6.83

CAGE

cerebrum:2.85

cerebellum:-

brain stem:1.72

corpus callosum/glia:1.74

pineal gland:2.74

peripheral nerve:-

spine:2.43

retina:-

eye:-

artery/aorta:2.96

vein:3.03

lymphnode:2.49

peripheral blood:-

spleen:2.82

thymus:3.72

bone marrow:-

adipose:1.79

bone:-

skin:-

RNA-seq

cerebrum:3.37

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:4.26

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.09

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:100.20

placenta:14.60

prostate:225.30

ovary:37.30

testis:56.20

heart:76.60

muscle:60.30

esophagus:-

stomach:127.50

intestine:-

colon:161.10

liver/hepato:84.40

lung:58.70

bladder:-

kidney:20.80

pituitary:-

thyroid/parathyroid:327.50

adrenal gland:-

pancreas:97.80

breast:204.40

salivary:-

GeneChip

uterus:7.77

placenta:7.11

prostate:7.83

ovary:7.77

testis:6.84

heart:6.49

muscle:6.31

esophagus:7.05

stomach:7.39

intestine:6.95

colon:7.33

liver/hepato:6.06

lung:7.14

bladder:-

kidney:7.19

pituitary:7.41

thyroid/parathyroid:7.51

adrenal gland:7.34

pancreas:6.73

breast:7.54

salivary:7.32

CAGE

uterus:4.07

placenta:2.19

prostate:3.78

ovary:3.38

testis:2.57

heart:2.17

muscle:0.93

esophagus:2.83

stomach:-

intestine:2.47

colon:2.69

liver/hepato:0.96

lung:2.74

bladder:3.04

kidney:2.77

pituitary:3.11

thyroid/parathyroid:2.76

adrenal gland:-

pancreas:2.76

breast:1.80

salivary:3.03

RNA-seq

uterus:-

placenta:-

prostate:3.46

ovary:4.86

testis:3.76

heart:1.10

muscle:0.96

esophagus:-

stomach:-

intestine:-

colon:3.41

liver/hepato:1.11

lung:3.62

bladder:-

kidney:3.27

pituitary:-

thyroid/parathyroid:4.19

adrenal gland:3.85

pancreas:-

breast:2.80

salivary:-

IDs

Refseq ID	NM_001005273
Gene ID	1107
Unigene ID	Hs.25601
Probe set ID	208807_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000170004
GTEx ID	ENSG00000170004

Orthologous Gene

Mouse[1]	NM_146019
Rat[1]	NM_146019

Chromosomal Region

17p13.1 [7,788,124 - 7,816,078]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR000953	Chromo domain
IPR014001	DEAD-like helicase, N-terminal
IPR014021	Helicase, superfamily 1/2, ATP-binding domain
IPR019787	Zinc finger, PHD-finger
IPR001965	Zinc finger, PHD-type

GO:0051297	centrosome organization
GO:0016568	chromatin modification
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0006355	regulation of transcription, DNA-dependent
GO:0007051	spindle organization
GO:0006351	transcription, DNA-dependent

GO:0005813	centrosome
GO:0005737	cytoplasm
GO:0045111	intermediate filament cytoskeleton
GO:0005730	nucleolus
GO:0005634	nucleus
GO:0016581	NuRD complex

GO:0005524	ATP binding
GO:0004003	ATP-dependent DNA helicase activity
GO:0003677	DNA binding
GO:0004386	helicase activity
GO:0005515	protein binding
GO:0008270	zinc ion binding

chromodomain helicase DNA binding protein 3

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function