La ribonucleoprotein domain family, member 4

 jump to detail

Synonym

MGC74631, PP13296, La ribonucleoprotein domain family member 4, La-related protein 4, DKFZp686E039, LARP4, La ribonucleoprotein domain family, member 4

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:1.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:6.91 cerebellum:6.82 brain stem:7.23 corpus callosum/glia:7.07 pineal gland:- peripheral nerve:7.63 spine:7.12 retina:- eye:- artery/aorta:7.05 vein:6.86 lymphnode:7.20 peripheral blood:- spleen:7.27 thymus:7.54 bone marrow:6.76 adipose:6.95 bone:- skin:7.08
CAGE cerebrum:3.24 cerebellum:- brain stem:3.62 corpus callosum/glia:3.05 pineal gland:4.08 peripheral nerve:- spine:3.82 retina:- eye:- artery/aorta:3.42 vein:3.06 lymphnode:3.11 peripheral blood:- spleen:3.30 thymus:3.35 bone marrow:- adipose:3.62 bone:- skin:-
RNA-seq cerebrum:0.43 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.99 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.03 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:- prostate:- ovary:- testis:4.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:7.42 placenta:7.10 prostate:7.75 ovary:7.18 testis:6.74 heart:7.35 muscle:8.21 esophagus:7.21 stomach:7.30 intestine:6.94 colon:5.88 liver/hepato:8.96 lung:7.17 bladder:- kidney:7.61 pituitary:7.27 thyroid/parathyroid:7.41 adrenal gland:8.03 pancreas:6.77 breast:7.40 salivary:6.97
CAGE uterus:3.37 placenta:3.66 prostate:3.30 ovary:3.31 testis:3.13 heart:3.56 muscle:4.00 esophagus:3.30 stomach:- intestine:3.56 colon:3.21     liver/hepato:4.23    lung:3.51 bladder:3.51 kidney:4.14 pituitary:3.91 thyroid/parathyroid:3.45 adrenal gland:- pancreas:3.29 breast:3.62 salivary:3.83
RNA-seq uterus:- placenta:- prostate:1.70 ovary:1.58 testis:1.40 heart:2.32 muscle:2.33 esophagus:- stomach:- intestine:- colon:1.13     liver/hepato:3.05        lung:0.58    bladder:- kidney:2.45 pituitary:- thyroid/parathyroid:2.19 adrenal gland:0.81 pancreas:- breast:1.03 salivary:-

Gene Information

IDs

Refseq ID NM_052879
Gene ID 113251
Unigene ID Hs.26613
Probe set ID 212714_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000161813
GTEx ID ENSG00000161813

Orthologous Gene

Mouse[2]  NM_001024526, NM_001080948
Rat[2]  NM_001024526, NM_001080948

Chromosomal Region

12q13.12  [50,786,166  -  50,873,787]

Gene Family (Interpro ID)

IPR006630  RNA-binding protein Lupus La
IPR011991  Winged helix repressor DNA-binding

Link to Pubmed  (Pubmed ID)

8619474
9110174
12477932
14702039
15498874
15572213
16344560
16682284
18781797
19322201
19946888
20020773
21098120
21139048
21145461
21693764
21832049
21890473
22505724
22586326
23000965
23537643
23887937
24778252
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0007010  cytoskeleton organization
GO:0022604  regulation of cell morphogenesis

Molecular Function

GO:0003723  RNA binding