chromosome 17 open reading frame 49

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Synonym

C17orf49, chromosome 17 open reading frame 49, MGC49942

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:20.10 cerebellum:- brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:41.10 artery/aorta:30 vein:- lymphnode:111.20 peripheral blood:18.20 spleen:56.70 thymus:12.90 bone marrow:98.40 adipose:- bone:- skin:9.60
GeneChip nodata
CAGE cerebrum:3.46 cerebellum:- brain stem:3.35 corpus callosum/glia:3.47 pineal gland:3.35 peripheral nerve:- spine:3.16 retina:- eye:- artery/aorta:3.72 vein:4.17 lymphnode:4.18 peripheral blood:- spleen:4.20 thymus:4.32 bone marrow:- adipose:3.76 bone:- skin:-
RNA-seq cerebrum:3.65 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.57 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.89 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:47.40 prostate:90.10 ovary:- testis:34.60 heart:89.40 muscle:- esophagus:- stomach:- intestine:32.40 colon:17     liver/hepato:10.60        lung:44    bladder:- kidney:62.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:55.80 salivary:-
GeneChip nodata
CAGE uterus:3.49 placenta:3.74 prostate:3.49 ovary:3.32 testis:3.70 heart:3.62 muscle:3.81 esophagus:3.83 stomach:- intestine:3.39 colon:3.48     liver/hepato:3.91    lung:4.07 bladder:3.40 kidney:3.63 pituitary:3.10 thyroid/parathyroid:3.79 adrenal gland:- pancreas:3.57 breast:3.33 salivary:3.64
RNA-seq uterus:- placenta:- prostate:3.92 ovary:3.87 testis:4.27 heart:2.77 muscle:4.22 esophagus:- stomach:- intestine:- colon:3.59     liver/hepato:3.30        lung:4.72    bladder:- kidney:3.79 pituitary:- thyroid/parathyroid:4.31 adrenal gland:5.07 pancreas:- breast:4.09 salivary:-

Gene Information

IDs

Refseq ID NM_174893
Gene ID 124944
Unigene ID Hs.511801
Probe set ID -
Ensembl ID ENSG00000161939
ENSG00000258315
GTEx ID ENSG00000161939
ENSG00000258315

Orthologous Gene

Mouse[1]  NM_001177601, NM_001177603, NM_001177606, NM_001177607, NM_026757, NM_145758
Rat[1]  NM_001127521, NM_001177603, NM_001177606, NM_001177607, NM_026757, NM_145758

Chromosomal Region

17p13.1  [6,915,954  -  6,920,839]
17p13.1  [6,917,814  -  6,920,844]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8889548
11181995
12477932
14702039
15146197
15489334
15960975
16712791
16964243
17207965
20516061
20850016
21139048
22623531

Gene Ontology  (GO ID)

Biological Process

GO:0016568  chromatin modification

Cellular Component

GO:0071339  MLL1 complex
GO:0016589  NURF complex

Molecular Function

GO:0003682  chromatin binding
GO:0003677  DNA binding