vacuolar protein sorting 13 homolog B (yeast)

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Synonym

VPS13B, DKFZp313I0811, COH1, Vacuolar protein sorting-associated protein 13B, Cohen syndrome protein 1, CHS1, Cohen syndrome 1, KIAA0532, vacuolar protein sorting 13B (yeast)

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:53.30 cerebellum:63 brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:61.30 spine:- retina:- eye:47 artery/aorta:89.90 vein:66.60 lymphnode:80.90 peripheral blood:18.20 spleen:18.90 thymus:116 bone marrow:196.80 adipose:80.70 bone:12.80 skin:110.40
GeneChip cerebrum:5.91 cerebellum:5.67 brain stem:5.78 corpus callosum/glia:6.29 pineal gland:- peripheral nerve:6.30 spine:6.46 retina:- eye:- artery/aorta:6.38 vein:6.03 lymphnode:6.60 peripheral blood:- spleen:6.50 thymus:7.16 bone marrow:5.78 adipose:6.41 bone:- skin:6.38
CAGE cerebrum:3.30 cerebellum:- brain stem:3.35 corpus callosum/glia:3.06 pineal gland:3.96 peripheral nerve:- spine:3.58 retina:- eye:- artery/aorta:3.48 vein:3.51 lymphnode:3.54 peripheral blood:- spleen:3.39 thymus:3.65 bone marrow:- adipose:3.33 bone:- skin:-
RNA-seq cerebrum:0.97 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.75 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.41 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:51 prostate:11.30 ovary:298.10 testis:77.90 heart:25.50 muscle:40.20 esophagus:- stomach:63.70 intestine:- colon:101.80     liver/hepato:73.90        lung:102.60    bladder:- kidney:41.60 pituitary:463.90 thyroid/parathyroid:- adrenal gland:101.60 pancreas:35.60 breast:316 salivary:-
GeneChip uterus:7.49 placenta:5.76 prostate:7.53 ovary:7.09 testis:6.33 heart:5.66 muscle:5.48 esophagus:6.15 stomach:6.12 intestine:5.75 colon:5.47 liver/hepato:5.58 lung:6.19 bladder:- kidney:5.96 pituitary:6.46 thyroid/parathyroid:6.41 adrenal gland:6.45 pancreas:4.85 breast:6.58 salivary:5.83
CAGE uterus:3.97 placenta:2.96 prostate:3.37 ovary:3.48 testis:3.48 heart:3.00 muscle:2.72 esophagus:3.02 stomach:- intestine:3.25 colon:3.28     liver/hepato:2.25    lung:3.54 bladder:3.29 kidney:2.71 pituitary:3.90 thyroid/parathyroid:2.59 adrenal gland:- pancreas:2.71 breast:3.27 salivary:2.88
RNA-seq uterus:- placenta:- prostate:2.04 ovary:1.92 testis:2.12 heart:1.17 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.78     liver/hepato:0.87        lung:1.15    bladder:- kidney:1.18 pituitary:- thyroid/parathyroid:1.70 adrenal gland:1.28 pancreas:- breast:1.53 salivary:-

Gene Information

IDs

Refseq ID NM_152564
Gene ID 157680
Unigene ID Hs.191540
Probe set ID 213243_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000132549
GTEx ID ENSG00000132549

Orthologous Gene

Mouse[1]  NM_177151
Rat[1]  NM_001134886

Chromosomal Region

8q22.2  [100,025,494  -  100,889,808]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7920642
8125298
9359041
9628581
12477932
12730828
14702039
15141358
15154116
15498460
17081983
17990063
18655112
19006247
19320733
19533689
19680589
19913121
20301655
20360068
20461111
20628086
20656880
21139048
21353197
21865173
21906983
22745009
23455922

Gene Ontology  (GO ID)

Biological Process

GO:0015031  protein transport