psoriasis susceptibility 1 candidate 2

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Synonym

psoriasis susceptibility 1 candidate 2, SPR1 protein, PSORS1C2, C6orf17, chromosome 6 open reading frame 17, SPR1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:5.19 cerebellum:5.14 brain stem:5.24 corpus callosum/glia:5.17 pineal gland:- peripheral nerve:5.10 spine:5.14 retina:- eye:- artery/aorta:5.10 vein:5.46 lymphnode:5.05 peripheral blood:- spleen:5.06 thymus:4.80 bone marrow:5.42 adipose:5.12 bone:- skin:6.85
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:1.23 lymphnode:0.26 peripheral blood:- spleen:0 thymus:2.56 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.06 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.19 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:37.30 testis:- heart:12.80 muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.91 placenta:5.07 prostate:4.68 ovary:4.84 testis:5 heart:5.33 muscle:5.30 esophagus:5.13 stomach:5.09 intestine:5.28 colon:5.35 liver/hepato:5.22 lung:4.94 bladder:- kidney:5.11 pituitary:5.05 thyroid/parathyroid:4.74 adrenal gland:5.18 pancreas:5.26 breast:5.53 salivary:5.19
CAGE uterus:0.25 placenta:0 prostate:0.08 ovary:0.07 testis:0.04 heart:0 muscle:0 esophagus:1.01 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:0.18 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.31 ovary:0.21 testis:0.47 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.15     liver/hepato:0        lung:0    bladder:- kidney:0.06 pituitary:- thyroid/parathyroid:0 adrenal gland:0.20 pancreas:- breast:0.21 salivary:-

Gene Information

IDs

Refseq ID NM_014069
Gene ID 170680
Unigene ID Hs.146824
Probe set ID 220635_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000204538
GTEx ID ENSG00000204538

Orthologous Gene

Mouse[1]  NM_020576
Rat[1]  NM_020576

Chromosomal Region

6p21.33  [31,105,313  -  31,107,127]
HSCHR6_MHC_QBL  [31,097,761  -  31,099,575]
HSCHR6_MHC_MANN  [31,150,282  -  31,152,098]
HSCHR6_MHC_MCF  [31,183,859  -  31,185,675]
HSCHR6_MHC_DBB  [31,099,052  -  31,100,868]
HSCHR6_MHC_COX  [31,097,829  -  31,099,645]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8999895
10545595
12823445
12930300
15523160
19851445
21738480
21750679
22821332
23144326
23263863
23955597

Gene Ontology  (GO ID)

Biological Process

GO:0008150  biological_process

Cellular Component

GO:0005575  cellular_component
GO:0005576  extracellular region

Molecular Function

GO:0003674  molecular_function