pre T-cell antigen receptor alpha

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Synonym

pre T-cell antigen receptor alpha, PT-ALPHA, PTCRA, PTA

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:6.80 cerebellum:6.78 brain stem:6.81 corpus callosum/glia:6.85 pineal gland:- peripheral nerve:6.64 spine:6.76 retina:- eye:- artery/aorta:6.76 vein:6.85 lymphnode:6.74 peripheral blood:- spleen:6.53 thymus:8.04 bone marrow:6.80 adipose:6.69 bone:- skin:6.56
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0.09 retina:- eye:- artery/aorta:0.18 vein:3.70 lymphnode:0.47 peripheral blood:- spleen:0.17 thymus:5.48 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:6.57 placenta:6.58 prostate:6.28 ovary:6.63 testis:6.30 heart:6.73 muscle:6.83 esophagus:6.65 stomach:6.61 intestine:6.71 colon:6.94 liver/hepato:6.72 lung:6.82 bladder:- kidney:6.63 pituitary:6.84 thyroid/parathyroid:6.64 adrenal gland:6.66 pancreas:7.07 breast:6.48 salivary:6.78
CAGE uterus:0 placenta:0 prostate:0 ovary:0 testis:0 heart:0.03 muscle:0 esophagus:0 stomach:- intestine:0 colon:0.08     liver/hepato:0    lung:0.68 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0 ovary:0.00 testis:0.00 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0 adrenal gland:0.07 pancreas:- breast:0.00 salivary:-

IDs

Refseq ID NM_138296
Gene ID 171558
Unigene ID -
Probe set ID 215492_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000171611
GTEx ID ENSG00000171611

Orthologous Gene

Mouse[1]  NM_011195
Rat[1]  NM_011195

Chromosomal Region

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

Gene Ontology  (GO ID)

Biological Process

GO:0070244  negative regulation of thymocyte apoptosis

Cellular Component

GO:0016021  integral to membrane

Molecular Function

GO:0005515  protein binding