apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F

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Synonym

MGC74891, BK150C2.4.MRNA, APOBEC3F, KA6, DNA dC->dU-editing enzyme APOBEC-3F, ARP8

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

nodata

GeneChip

cerebrum:4.02

cerebellum:3.86

brain stem:4.08

corpus callosum/glia:3.89

pineal gland:-

peripheral nerve:4.34

spine:4.11

retina:-

eye:-

artery/aorta:4.15

vein:4.17

lymphnode:4.59

peripheral blood:-

spleen:5.12

thymus:4.94

bone marrow:4.40

adipose:4.37

bone:-

skin:4.28

CAGE

cerebrum:0.37

cerebellum:-

brain stem:0.55

corpus callosum/glia:1.01

pineal gland:0.79

peripheral nerve:-

spine:0.79

retina:-

eye:-

artery/aorta:1.10

vein:1.61

lymphnode:1.75

peripheral blood:-

spleen:2.06

thymus:1.35

bone marrow:-

adipose:1.47

bone:-

skin:-

RNA-seq

cerebrum:0.24

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.40

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:0.95

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

nodata

GeneChip

uterus:4.73

placenta:3.99

prostate:4.79

ovary:4.88

testis:5.26

heart:4.18

muscle:4.07

esophagus:4.28

stomach:4.30

intestine:4.23

colon:4.43

liver/hepato:4.23

lung:4.18

bladder:-

kidney:4.07

pituitary:4.39

thyroid/parathyroid:4.31

adrenal gland:4.53

pancreas:4.19

breast:4.24

salivary:4.25

CAGE

uterus:1.69

placenta:0.48

prostate:1.38

ovary:2.07

testis:1.89

heart:0.86

muscle:0.45

esophagus:1.26

stomach:-

intestine:0.43

colon:0.97

liver/hepato:1.07

lung:1.45

bladder:1.21

kidney:1.30

pituitary:0.95

thyroid/parathyroid:0.95

adrenal gland:-

pancreas:1.21

breast:0

salivary:1.39

RNA-seq

uterus:-

placenta:-

prostate:1.69

ovary:2.62

testis:1.55

heart:0.22

muscle:0.22

esophagus:-

stomach:-

intestine:-

colon:0.45

liver/hepato:0.60

lung:1.32

bladder:-

kidney:0.63

pituitary:-

thyroid/parathyroid:0.96

adrenal gland:2.36

pancreas:-

breast:0.79

salivary:-

IDs

Refseq ID	NM_145298
Gene ID	200316
Unigene ID	-
Probe set ID	214995_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000128394
GTEx ID	ENSG00000128394

Orthologous Gene

Mouse [0]
Rat [0]

Chromosomal Region

22q13.1 [39,436,609 - 39,449,915]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0016553	base conversion or substitution editing
GO:0009972	cytidine deamination
GO:0051607	defense response to virus
GO:0070383	DNA cytosine deamination
GO:0080111	DNA demethylation
GO:0045087	innate immune response
GO:0045869	negative regulation of retroviral genome replication
GO:0010529	negative regulation of transposition
GO:0045071	negative regulation of viral genome replication
GO:0048525	negative regulation of viral reproduction
GO:0002230	positive regulation of defense response to virus by host

Cellular Component

GO:0030895	apolipoprotein B mRNA editing enzyme complex
GO:0005737	cytoplasm
GO:0000932	cytoplasmic mRNA processing body
GO:0030529	ribonucleoprotein complex

Molecular Function

GO:0004126	cytidine deaminase activity
GO:0005515	protein binding
GO:0003723	RNA binding
GO:0008270	zinc ion binding

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function