spastic paraplegia 20 (Troyer syndrome)

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Synonym

SPG20, TAHCCP1, KIAA0610, SPARTIN, Spartin, spastic paraplegia 20, spartin (Troyer syndrome)

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:136.30

cerebellum:113.30

brain stem:-

corpus callosum/glia:262.50

pineal gland:-

peripheral nerve:61.30

spine:112.30

retina:237.30

eye:276.20

artery/aorta:329.70

vein:-

lymphnode:20.20

peripheral blood:91.10

spleen:94.50

thymus:77.30

bone marrow:39.40

adipose:40.30

bone:25.60

skin:76.80

GeneChip

cerebrum:7.27

cerebellum:6.70

brain stem:7.56

corpus callosum/glia:7.80

pineal gland:-

peripheral nerve:7.33

spine:7.89

retina:-

eye:-

artery/aorta:7

vein:7.07

lymphnode:5.94

peripheral blood:-

spleen:7

thymus:6.79

bone marrow:7.01

adipose:7.03

bone:-

skin:6.58

CAGE

cerebrum:4.56

cerebellum:-

brain stem:4.75

corpus callosum/glia:4.62

pineal gland:5.25

peripheral nerve:-

spine:5.23

retina:-

eye:-

artery/aorta:4.53

vein:3.88

lymphnode:3.62

peripheral blood:-

spleen:4.25

thymus:3.33

bone marrow:-

adipose:4.67

bone:-

skin:-

RNA-seq

cerebrum:3.82

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.25

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.53

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:145.80

placenta:116.60

prostate:56.30

ovary:74.50

testis:69.20

heart:38.30

muscle:20.10

esophagus:-

stomach:63.70

intestine:32.40

colon:-

liver/hepato:84.40

lung:107.50

bladder:125.60

kidney:104

pituitary:232

thyroid/parathyroid:-

adrenal gland:101.60

pancreas:62.20

breast:83.60

salivary:-

GeneChip

uterus:7.81

placenta:7.90

prostate:7.52

ovary:7.94

testis:6.98

heart:6.86

muscle:6.73

esophagus:6.09

stomach:6.49

intestine:6.69

colon:5.72

liver/hepato:5.04

lung:6.79

bladder:-

kidney:6.76

pituitary:7.14

thyroid/parathyroid:7

adrenal gland:7.59

pancreas:5.53

breast:6.74

salivary:5.87

CAGE

uterus:4.69

placenta:4.82

prostate:4.78

ovary:4.89

testis:4.41

heart:4.48

muscle:4.01

esophagus:4.33

stomach:-

intestine:3.51

colon:3.80

liver/hepato:2.84

lung:4.39

bladder:4.89

kidney:4.52

pituitary:4.77

thyroid/parathyroid:4.42

adrenal gland:-

pancreas:2.66

breast:5.26

salivary:3.59

RNA-seq

uterus:-

placenta:-

prostate:4.50

ovary:5.12

testis:4.48

heart:2.53

muscle:2.53

esophagus:-

stomach:-

intestine:-

colon:4.94

liver/hepato:2.09

lung:3.88

bladder:-

kidney:4.01

pituitary:-

thyroid/parathyroid:4.10

adrenal gland:3.20

pancreas:-

breast:3.92

salivary:-

IDs

Refseq ID	NM_001142294
Gene ID	23111
Unigene ID	Hs.440414
Probe set ID	212526_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000133104
GTEx ID	ENSG00000133104

Orthologous Gene

Mouse[9]	NM_001144987, NM_001144988, NM_144895
Rat[1]	NM_001106433, NM_001144988, NM_144895

GO:0009838	abscission
GO:0060612	adipose tissue development
GO:0008219	cell death
GO:0051301	cell division
GO:0000910	cytokinesis
GO:0034389	lipid particle organization
GO:0030514	negative regulation of BMP signaling pathway
GO:0048698	negative regulation of collateral sprouting in the absence of injury
GO:0050905	neuromuscular process
GO:0051881	regulation of mitochondrial membrane potential

GO:0005737	cytoplasm
GO:0005811	lipid particle
GO:0030496	midbody
GO:0005741	mitochondrial outer membrane
GO:0045202	synapse

GO:0005515	protein binding
GO:0031625	ubiquitin protein ligase binding

spastic paraplegia 20 (Troyer syndrome)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function