splicing factor 3b, subunit 1, 155kDa

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Synonym

splicing factor 3b, subunit 1, 155kDa, Splicing factor 3B subunit 1, Pre-mRNA-splicing factor SF3b 155 kDa subunit, Spliceosome-associated protein 155, SAP 155, Prp10, PRP10, SAP155, SF3b155, SF3B1, PRPF10

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:73.50 cerebellum:- brain stem:- corpus callosum/glia:29.20 pineal gland:148.30 peripheral nerve:214.70 spine:- retina:- eye:88.20 artery/aorta:329.70 vein:- lymphnode:111.20 peripheral blood:91.10 spleen:56.70 thymus:12.90 bone marrow:216.50 adipose:80.70 bone:102.40 skin:456
GeneChip cerebrum:8.96 cerebellum:9.38 brain stem:9.18 corpus callosum/glia:9.49 pineal gland:- peripheral nerve:9.14 spine:9.07 retina:- eye:- artery/aorta:9.20 vein:9.38 lymphnode:10.13 peripheral blood:- spleen:10.13 thymus:10.71 bone marrow:9.55 adipose:9.73 bone:- skin:9.62
CAGE cerebrum:4.89 cerebellum:- brain stem:5.22 corpus callosum/glia:5.08 pineal gland:5.25 peripheral nerve:- spine:5.18 retina:- eye:- artery/aorta:4.77 vein:5.19 lymphnode:5.07 peripheral blood:- spleen:5.48 thymus:5.80 bone marrow:- adipose:5.18 bone:- skin:-
RNA-seq cerebrum:5.23 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:6.36 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:5.33 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:54.70 placenta:91.10 prostate:78.90 ovary:74.50 testis:13 heart:268.20 muscle:160.70 esophagus:- stomach:191.20 intestine:226.80 colon:186.60     liver/hepato:179.40        lung:146.60    bladder:125.60 kidney:176.80 pituitary:- thyroid/parathyroid:- adrenal gland:152.40 pancreas:80 breast:139.40 salivary:-
GeneChip uterus:10.12 placenta:9.81 prostate:10.08 ovary:10.05 testis:9.48 heart:9.34 muscle:9.38 esophagus:9.29 stomach:9.62 intestine:9.52 colon:8.65 liver/hepato:9.23 lung:9.75 bladder:- kidney:9.20 pituitary:9.50 thyroid/parathyroid:9.59 adrenal gland:9.63 pancreas:9.03 breast:9.62 salivary:9.27
CAGE uterus:5.39 placenta:5.36 prostate:5.20 ovary:5.37 testis:4.82 heart:4.94 muscle:5.02 esophagus:5.19 stomach:- intestine:5.28 colon:4.84     liver/hepato:5.02    lung:5.17 bladder:5.40 kidney:5.13 pituitary:5.59 thyroid/parathyroid:5.00 adrenal gland:- pancreas:4.54 breast:4.87 salivary:4.83
RNA-seq uterus:- placenta:- prostate:5.94 ovary:6.02 testis:5.72 heart:5.20 muscle:5.14 esophagus:- stomach:- intestine:- colon:5.45     liver/hepato:4.79        lung:6.11    bladder:- kidney:5.70 pituitary:- thyroid/parathyroid:6.30 adrenal gland:6.15 pancreas:- breast:5.42 salivary:-

Gene Information

IDs

Refseq ID NM_012433
Gene ID 23451
Unigene ID Hs.632554
Probe set ID 201071_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000115524
GTEx ID ENSG00000115524

Orthologous Gene

Mouse[3]  NM_031179
Rat[1]  NM_053426

Chromosomal Region

2q33.1  [198,256,698  -  198,299,815]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8619474
9110174
9585501
9671485
9891079
10490618
10688664
10737800
10882114
11101529
11406595
11500380
11991638
12105215
12226669
12234937
12477932
12549820
12738865
14702039
14730023
15146077
15231748
15302935
15456888
15840729
15848144
16051665
16055720
16216881
16335966
16376933
16512921
16603771
16790528
16964243
17081983
17332742
17353931
17403666
17620599
17803295
17931603
18076038
18173839
18457437
18559850
18842582
18854154
18974054
19454010
19471022
19596686
19738201
19805454
19850743
20305087
20360068
20462248
20936779
20972266
21081666
21139048
21145461
21182205
21252943
21693764
21886174
21890473
21900206
21906983
21963094
21987572
21995386
21998214
22039264
22064353
22064355
22096241
22113938
22158541
22178446
22268729
22323480
22365833
22461140
22496461
22505724
22586326
22738114
22751105
22797925
22826563
22921018
22929973
22939629
23000965
23084401
23113893
23125841
23138133
23151878
23160465
23184937
23243274
23280334
23300182
23313955
23335386
23337928
23395771
23435461
23531595
23558524
23568491
23594705
23594796
23620080
23685408
23694694
23793026
23831919
23861464
24052622
24113472
24141330
24250222
24332808
24457600
24550385
24583282
24591637
24639526
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0009952  anterior/posterior pattern formation
GO:0010467  gene expression
GO:0000398  nuclear mRNA splicing, via spliceosome
GO:0008380  RNA splicing
GO:0000375  RNA splicing, via transesterification reactions

Cellular Component

GO:0071013  catalytic step 2 spliceosome
GO:0016607  nuclear speck
GO:0005654  nucleoplasm
GO:0005634  nucleus
GO:0005681  spliceosomal complex
GO:0005689  U12-type spliceosomal complex

Molecular Function

GO:0003682  chromatin binding