serine/arginine repetitive matrix 2

Synonym

SRm300, FLJ21926, 300-KD, DKFZp686O15166, SR-related nuclear matrix protein of 300 kDa, HSPC075, Ser/Arg-related nuclear matrix protein, FLJ22250, MGC40295, SRL300, Serine/arginine repetitive matrix protein 2, KIAA0324, SRM300, SRRM2, serine/arginine repetitive matrix 2, Splicing coactivator subunit SRm300, 300 kDa nuclear matrix antigen

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:205

cerebellum:302.30

brain stem:-

corpus callosum/glia:58.30

pineal gland:-

peripheral nerve:245.40

spine:561.50

retina:118.60

eye:152.80

artery/aorta:89.90

vein:266.60

lymphnode:303.30

peripheral blood:164

spleen:208

thymus:528.20

bone marrow:1003.70

adipose:80.70

bone:115.20

skin:446.40

GeneChip

cerebrum:9.27

cerebellum:9.48

brain stem:8.95

corpus callosum/glia:9.76

pineal gland:-

peripheral nerve:9.96

spine:9.08

retina:-

eye:-

artery/aorta:10.20

vein:9.49

lymphnode:10.54

peripheral blood:-

spleen:11.01

thymus:9.86

bone marrow:9.68

adipose:9.75

bone:-

skin:9.41

CAGE

cerebrum:5.43

cerebellum:-

brain stem:5.63

corpus callosum/glia:5.71

pineal gland:5.71

peripheral nerve:-

spine:5.43

retina:-

eye:-

artery/aorta:5.42

vein:5.43

lymphnode:4.99

peripheral blood:-

spleen:5.22

thymus:5.29

bone marrow:-

adipose:5.23

bone:-

skin:-

RNA-seq

cerebrum:4.61

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:5.63

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:5.22

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:300.70

placenta:327.90

prostate:563.20

ovary:186.30

testis:186

heart:89.40

muscle:120.50

esophagus:-

stomach:191.20

intestine:259.20

colon:1517.90

liver/hepato:211.10

lung:337.20

bladder:125.60

kidney:207.90

pituitary:-

thyroid/parathyroid:163.70

adrenal gland:101.60

pancreas:133.40

breast:678.40

salivary:-

GeneChip

uterus:10.10

placenta:9.25

prostate:9.80

ovary:9.88

testis:9.29

heart:9.52

muscle:9.23

esophagus:9.95

stomach:10.70

intestine:8.86

colon:9.93

liver/hepato:10.55

lung:10.41

bladder:-

kidney:10.14

pituitary:9.30

thyroid/parathyroid:10.35

adrenal gland:11.03

pancreas:8.30

breast:10.31

salivary:10.24

CAGE

uterus:5.61

placenta:5.25

prostate:5.40

ovary:5.54

testis:5.24

heart:5.21

muscle:5.77

esophagus:5.13

stomach:-

intestine:5.46

colon:5.41

liver/hepato:4.63

lung:5.31

bladder:5.31

kidney:4.93

pituitary:5.38

thyroid/parathyroid:5.08

adrenal gland:-

pancreas:5.13

breast:5.06

salivary:5.25

RNA-seq

uterus:-

placenta:-

prostate:5.53

ovary:6.01

testis:5.33

heart:4.40

muscle:5.66

esophagus:-

stomach:-

intestine:-

colon:4.71

liver/hepato:3.83

lung:5.49

bladder:-

kidney:4.66

pituitary:-

thyroid/parathyroid:5.37

adrenal gland:5.39

pancreas:-

breast:4.71

salivary:-

IDs

Refseq ID	NM_016333
Gene ID	23524
Unigene ID	Hs.433343
Probe set ID	208610_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000167978
GTEx ID	ENSG00000167978

Orthologous Gene

Mouse[2]	NM_175229
Rat[2]	NM_175229

Chromosomal Region

16p13.3 [2,802,330 - 2,821,411]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

GO:0000398

nuclear mRNA splicing, via spliceosome

Cellular Component

GO:0015030	Cajal body
GO:0071013	catalytic step 2 spliceosome
GO:0016607	nuclear speck
GO:0005730	nucleolus
GO:0005634	nucleus

Molecular Function

GO:0070742	C2H2 zinc finger domain binding
GO:0047485	protein N-terminus binding
GO:0003723	RNA binding

serine/arginine repetitive matrix 2

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function