glioblastoma amplified sequence

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Synonym

Glioblastoma amplified sequence, glioblastoma amplified sequence, Protein NipSnap2, GBAS, NIPSNAP2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:113.80 cerebellum:63 brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:61.30 spine:- retina:118.60 eye:41.10 artery/aorta:149.90 vein:- lymphnode:131.40 peripheral blood:127.50 spleen:37.80 thymus:38.70 bone marrow:78.70 adipose:403.30 bone:25.60 skin:91.20
GeneChip cerebrum:7.39 cerebellum:6.81 brain stem:7.56 corpus callosum/glia:7.11 pineal gland:- peripheral nerve:6.80 spine:7.53 retina:- eye:- artery/aorta:7 vein:7.75 lymphnode:6.63 peripheral blood:- spleen:6.46 thymus:7.63 bone marrow:6.25 adipose:7.61 bone:- skin:7.39
CAGE cerebrum:4.49 cerebellum:- brain stem:4.11 corpus callosum/glia:3.87 pineal gland:4.22 peripheral nerve:- spine:4.65 retina:- eye:- artery/aorta:4.31 vein:3.88 lymphnode:3.92 peripheral blood:- spleen:3.41 thymus:3.44 bone marrow:- adipose:3.72 bone:- skin:-
RNA-seq cerebrum:5.49 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:4.08 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.63 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:45.60 placenta:29.10 prostate:112.60 ovary:37.30 testis:38.90 heart:344.80 muscle:582.60 esophagus:- stomach:42.50 intestine:97.20 colon:25.40     liver/hepato:31.70        lung:63.50    bladder:376.80 kidney:124.80 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:44.50 breast:65.10 salivary:-
GeneChip uterus:7.68 placenta:6.60 prostate:8.33 ovary:7.76 testis:6.78 heart:8.75 muscle:10.41 esophagus:7.58 stomach:7.25 intestine:8.05 colon:6.82 liver/hepato:5.68 lung:6.80 bladder:- kidney:7.46 pituitary:7.10 thyroid/parathyroid:8.13 adrenal gland:7.91 pancreas:7.12 breast:7.37 salivary:8.19
CAGE uterus:3.66 placenta:3.12 prostate:3.66 ovary:3.60 testis:3.39 heart:5.52 muscle:5.89 esophagus:3.53 stomach:- intestine:3.50 colon:4.11     liver/hepato:2.38    lung:4.12 bladder:3.85 kidney:4.03 pituitary:4.07 thyroid/parathyroid:4.05 adrenal gland:- pancreas:3.99 breast:4.53 salivary:3.91
RNA-seq uterus:- placenta:- prostate:5.54 ovary:4.95 testis:5.31 heart:7.25 muscle:6.88 esophagus:- stomach:- intestine:- colon:5.20     liver/hepato:3.04        lung:4.87    bladder:- kidney:5.77 pituitary:- thyroid/parathyroid:6.70 adrenal gland:4.81 pancreas:- breast:5.66 salivary:-

Gene Information

IDs

Refseq ID NM_001483
Gene ID 2631
Unigene ID Hs.591069
Probe set ID 201816_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000146729
GTEx ID ENSG00000146729

Orthologous Gene

Mouse[2]  NM_008095
Rat[1]  NM_001017486

Chromosomal Region

7p11.2  [56,019,486  -  56,067,874]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

9615231
9661659
11076863
11256614
12477932
14676191
14702039
15489334
15489336
16212417
16381901
18187620
18457437
19615732
20562859
20877624
20888800
21145461
21890473
24137763
24255178
24654937
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0006754  ATP biosynthetic process
GO:0006119  oxidative phosphorylation

Cellular Component

GO:0005887  integral to plasma membrane
GO:0016020  membrane
GO:0005739  mitochondrion

Molecular Function

GO:0005515  protein binding