PDZ and LIM domain 3

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Synonym

DKFZp686L0362, Actinin-associated LIM protein, Alpha-actinin-2-associated LIM protein, PDZ and LIM domain protein 3, PDLIM3, PDZ and LIM domain 3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:67.60 cerebellum:75.60 brain stem:- corpus callosum/glia:87.50 pineal gland:- peripheral nerve:153.40 spine:112.30 retina:- eye:41.10 artery/aorta:329.70 vein:266.60 lymphnode:- peripheral blood:- spleen:75.60 thymus:25.80 bone marrow:19.70 adipose:4517.40 bone:38.40 skin:72
GeneChip cerebrum:6.17 cerebellum:7.08 brain stem:6.33 corpus callosum/glia:6.46 pineal gland:- peripheral nerve:5.65 spine:6.92 retina:- eye:- artery/aorta:9.26 vein:10.19 lymphnode:6.69 peripheral blood:- spleen:7.09 thymus:4.84 bone marrow:5.42 adipose:7.30 bone:- skin:7.30
CAGE cerebrum:2.61 cerebellum:- brain stem:2.19 corpus callosum/glia:2.95 pineal gland:3.74 peripheral nerve:- spine:3.13 retina:- eye:- artery/aorta:6.36 vein:4.85 lymphnode:3.69 peripheral blood:- spleen:3.67 thymus:1.24 bone marrow:- adipose:4.54 bone:- skin:-
RNA-seq cerebrum:0.08 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.59 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.13 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:346.30 placenta:47.40 prostate:90.10 ovary:37.30 testis:21.60 heart:281 muscle:2290.30 esophagus:342.80 stomach:764.70 intestine:356.40 colon:178.10     liver/hepato:21.10        lung:53.80    bladder:125.60 kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:35.60 breast:18.60 salivary:328.40
GeneChip uterus:8.04 placenta:6.84 prostate:8.44 ovary:8.43 testis:6.32 heart:8.93 muscle:12.52 esophagus:9.64 stomach:8.65 intestine:9.28 colon:8.25 liver/hepato:5.49 lung:7.95 bladder:- kidney:5.84 pituitary:6.88 thyroid/parathyroid:6.96 adrenal gland:6.27 pancreas:6.49 breast:8.07 salivary:6.31
CAGE uterus:4.87 placenta:2.88 prostate:5.25 ovary:4.87 testis:3.49 heart:5.84 muscle:8.36 esophagus:5.76 stomach:- intestine:4.02 colon:4.58     liver/hepato:1.88    lung:3.92 bladder:5.80 kidney:2.32 pituitary:2.94 thyroid/parathyroid:4.22 adrenal gland:- pancreas:2.90 breast:3.22 salivary:3.27
RNA-seq uterus:- placenta:- prostate:0.94 ovary:0.58 testis:3.63 heart:3.63 muscle:8.93 esophagus:- stomach:- intestine:- colon:0.43     liver/hepato:0.00        lung:2.04    bladder:- kidney:0.04 pituitary:- thyroid/parathyroid:6.10 adrenal gland:0.56 pancreas:- breast:4.74 salivary:-

Gene Information

IDs

Refseq ID NM_014476
Gene ID 27295
Unigene ID Hs.85862
Probe set ID 209621_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000154553
GTEx ID ENSG00000154553

Orthologous Gene

Mouse[1]  NM_016798
Rat [0]  

Chromosomal Region

4q35.1  [186,422,903  -  186,456,766]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
8661126
8828038
9334352
10063829
12477932
15084604
15203218
15489334
16192291
16344560
17254821
17258832
18029348
19412328
20801532
21549096
22412018
23824909

Gene Ontology  (GO ID)

Biological Process

GO:0007015  actin filament organization
GO:0007507  heart development

Cellular Component

GO:0015629  actin cytoskeleton
GO:0030018  Z disc

Molecular Function

GO:0008092  cytoskeletal protein binding
GO:0005515  protein binding
GO:0008307  structural constituent of muscle
GO:0008270  zinc ion binding