cadherin 19, type 2

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Synonym

CDH7, cadherin 19, type 2, UNQ478/PRO941, CDH19, Cadherin-19 precursor, CDH7L2

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:10.70 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:11.80 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:33.60
GeneChip cerebrum:5.48 cerebellum:4.16 brain stem:5.70 corpus callosum/glia:6.62 pineal gland:- peripheral nerve:9.68 spine:4.97 retina:- eye:- artery/aorta:6.17 vein:5.61 lymphnode:4.01 peripheral blood:- spleen:4.49 thymus:3.92 bone marrow:4.07 adipose:4.45 bone:- skin:5.08
CAGE cerebrum:2.59 cerebellum:- brain stem:3.62 corpus callosum/glia:2.84 pineal gland:3.94 peripheral nerve:- spine:3.65 retina:- eye:- artery/aorta:1.33 vein:1.80 lymphnode:0.22 peripheral blood:- spleen:1.69 thymus:0 bone marrow:- adipose:2.33 bone:- skin:-
RNA-seq cerebrum:2.60 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.15 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.88 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:9.10 placenta:- prostate:- ovary:- testis:4.30 heart:12.80 muscle:- esophagus:- stomach:- intestine:32.40 colon:-     liver/hepato:42.20        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.43 placenta:4.17 prostate:5.43 ovary:4.08 testis:4.06 heart:7.58 muscle:4.14 esophagus:4.83 stomach:5.20 intestine:5.12 colon:5.58 liver/hepato:4.50 lung:4.56 bladder:- kidney:3.57 pituitary:3.73 thyroid/parathyroid:4.01 adrenal gland:5.06 pancreas:4.55 breast:4.59 salivary:4.73
CAGE uterus:2.17 placenta:1.08 prostate:2.68 ovary:1.90 testis:1.28 heart:4.32 muscle:1.18 esophagus:3.43 stomach:- intestine:2.47 colon:2.40     liver/hepato:1.63    lung:1.33 bladder:2.82 kidney:0.67 pituitary:0.42 thyroid/parathyroid:1.73 adrenal gland:- pancreas:0.94 breast:0.90 salivary:1.67
RNA-seq uterus:- placenta:- prostate:2.34 ovary:0.94 testis:1.26 heart:3.14 muscle:0.37 esophagus:- stomach:- intestine:- colon:4.49     liver/hepato:0.91        lung:1.38    bladder:- kidney:0.23 pituitary:- thyroid/parathyroid:0.89 adrenal gland:0.80 pancreas:- breast:0.01 salivary:-

Gene Information

IDs

Refseq ID NM_021153
Gene ID 28513
Unigene ID Hs.42771
Probe set ID 206898_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000071991
GTEx ID ENSG00000071991

Orthologous Gene

Mouse[1]  NM_001081386
Rat[1]  NM_001009448

Chromosomal Region

18q22.1  [64,168,320  -  64,271,409]

Gene Family (Interpro ID)

IPR002126  Cadherin
IPR015919  Cadherin-like

Link to Pubmed  (Pubmed ID)

7566098
9615235
10861224
10995570
12118382
12477932
12975309
18184143
18364357
20358601

Gene Ontology  (GO ID)

Biological Process

GO:0016337  cell-cell adhesion
GO:0007156  homophilic cell adhesion

Cellular Component

GO:0016021  integral to membrane
GO:0005886  plasma membrane

Molecular Function

GO:0005509  calcium ion binding