transgelin 3

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Synonym

transgelin 3, Transgelin-3, NP22, NP25, TAGLN3, Neuronal protein NP25, Neuronal protein 22

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:130.40 cerebellum:25.20 brain stem:- corpus callosum/glia:- pineal gland:148.30 peripheral nerve:- spine:112.30 retina:- eye:141 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:14.40
GeneChip cerebrum:9.24 cerebellum:9.39 brain stem:9.38 corpus callosum/glia:7.66 pineal gland:- peripheral nerve:9.13 spine:8.08 retina:- eye:- artery/aorta:6.30 vein:6.16 lymphnode:5.76 peripheral blood:- spleen:5.70 thymus:5.75 bone marrow:5.94 adipose:6.30 bone:- skin:5.89
CAGE cerebrum:4.88 cerebellum:- brain stem:3.56 corpus callosum/glia:3.55 pineal gland:2.94 peripheral nerve:- spine:3.47 retina:- eye:- artery/aorta:0.59 vein:0.47 lymphnode:0.06 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:5.09 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:4.90    bladder:- kidney:- pituitary:116 thyroid/parathyroid:- adrenal gland:- pancreas:26.70 breast:- salivary:-
GeneChip uterus:5.98 placenta:6.25 prostate:5.92 ovary:6.05 testis:5.82 heart:6.11 muscle:5.85 esophagus:5.87 stomach:6.22 intestine:6.02 colon:6.39 liver/hepato:5.78 lung:5.88 bladder:- kidney:6.31 pituitary:8.58 thyroid/parathyroid:6.11 adrenal gland:6.20 pancreas:6.82 breast:5.90 salivary:5.91
CAGE uterus:0.26 placenta:0.08 prostate:0.66 ovary:0 testis:0.04 heart:0.32 muscle:0 esophagus:0.68 stomach:- intestine:0.77 colon:1.83     liver/hepato:0    lung:0.62 bladder:0.73 kidney:0.82 pituitary:3.73 thyroid/parathyroid:0.12 adrenal gland:- pancreas:0.94 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0.59 ovary:0.01 testis:0.00 heart:0.00 muscle:0.15 esophagus:- stomach:- intestine:- colon:2.02     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.00 adrenal gland:0.00 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_001008272
Gene ID 29114
Unigene ID Hs.169330
Probe set ID 204743_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000144834
GTEx ID ENSG00000144834

Orthologous Gene

Mouse[1]  NM_019754
Rat [0]  

Chromosomal Region

3q13.2  [111,717,511  -  111,732,734]

Gene Family (Interpro ID)

IPR016146  Calponin-homology
IPR001715  Calponin-like actin-binding
IPR003096  SM22/calponin

Link to Pubmed  (Pubmed ID)

8015377
10931946
11238712
12107411
12477932
14506410
15489334
15781144
17207965
21139048
22939629

Gene Ontology  (GO ID)

Biological Process

GO:0007417  central nervous system development
GO:0007517  muscle organ development
GO:0000122  negative regulation of transcription from RNA polymerase II promoter

Cellular Component

GO:0005634  nucleus