general transcription factor IIB

Synonym

general transcription factor IIB, TF2B, TFIIB, GTF2B, S300-II, Transcription initiation factor IIB, General transcription factor TFIIB

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:34.40

cerebellum:25.20

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:30.70

spine:-

retina:237.30

eye:17.60

artery/aorta:30

vein:133.30

lymphnode:101.10

peripheral blood:18.20

spleen:-

thymus:64.40

bone marrow:39.40

adipose:80.70

bone:-

skin:72

GeneChip

cerebrum:6.81

cerebellum:6.70

brain stem:7.09

corpus callosum/glia:6.80

pineal gland:-

peripheral nerve:7.13

spine:6.92

retina:-

eye:-

artery/aorta:6.89

vein:6.90

lymphnode:7.18

peripheral blood:-

spleen:7.39

thymus:7.87

bone marrow:7.45

adipose:7.01

bone:-

skin:7.42

CAGE

cerebrum:3.68

cerebellum:-

brain stem:3.64

corpus callosum/glia:3.13

pineal gland:3.80

peripheral nerve:-

spine:3.72

retina:-

eye:-

artery/aorta:3.56

vein:3.70

lymphnode:3.82

peripheral blood:-

spleen:3.75

thymus:4.11

bone marrow:-

adipose:3.72

bone:-

skin:-

RNA-seq

cerebrum:3.68

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.74

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.22

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:36.50

placenta:29.10

prostate:56.30

ovary:74.50

testis:26

heart:12.80

muscle:40.20

esophagus:-

stomach:-

intestine:-

colon:17

liver/hepato:84.40

lung:44

bladder:-

kidney:114.40

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:53.30

breast:37.20

salivary:-

GeneChip

uterus:7.45

placenta:7.56

prostate:7.77

ovary:7.69

testis:7.15

heart:6.48

muscle:6.81

esophagus:7.42

stomach:6.92

intestine:6.77

colon:6.73

liver/hepato:6.71

lung:7.54

bladder:-

kidney:6.61

pituitary:6.95

thyroid/parathyroid:7.05

adrenal gland:7.12

pancreas:6.12

breast:7.25

salivary:7.11

CAGE

uterus:3.46

placenta:3.83

prostate:3.55

ovary:3.53

testis:3.19

heart:3.41

muscle:3.30

esophagus:3.67

stomach:-

intestine:3.87

colon:3.42

liver/hepato:3.91

lung:3.85

bladder:3.63

kidney:3.53

pituitary:3.88

thyroid/parathyroid:3.74

adrenal gland:-

pancreas:3.67

breast:3.52

salivary:3.85

RNA-seq

uterus:-

placenta:-

prostate:3.85

ovary:3.96

testis:4.01

heart:2.66

muscle:2.51

esophagus:-

stomach:-

intestine:-

colon:3.44

liver/hepato:3.48

lung:4.13

bladder:-

kidney:3.72

pituitary:-

thyroid/parathyroid:4.23

adrenal gland:3.99

pancreas:-

breast:3.42

salivary:-

IDs

Refseq ID	NM_001514
Gene ID	2959
Unigene ID	Hs.481852
Probe set ID	208066_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000137947
GTEx ID	ENSG00000137947

Orthologous Gene

Mouse[1]	NM_145546
Rat [0]

Chromosomal Region

1p22.2 [89,318,615 - 89,357,627]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR011028	Cyclin-like
IPR013763	Cyclin-related

GO:0010467	gene expression
GO:0006355	regulation of transcription, DNA-dependent
GO:0006368	RNA elongation from RNA polymerase II promoter
GO:0006366	transcription from RNA polymerase II promoter
GO:0006367	transcription initiation from RNA polymerase II promoter
GO:0016032	viral reproduction
GO:0019048	virus-host interaction

GO:0005515	protein binding
GO:0017025	TATA-binding protein binding
GO:0046966	thyroid hormone receptor binding
GO:0008134	transcription factor binding
GO:0008270	zinc ion binding

general transcription factor IIB

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function