peptidyl arginine deiminase, type I

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Synonym

Protein-arginine deiminase type I, peptidyl arginine deiminase, type I, PDI1, HPAD10, Protein-arginine deiminase type-1, PADI1, Peptidylarginine deiminase I

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:5.90 cerebellum:- brain stem:- corpus callosum/glia:29.20 pineal gland:- peripheral nerve:30.70 spine:- retina:118.60 eye:11.80 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:4.80
GeneChip cerebrum:7.45 cerebellum:7.45 brain stem:7.54 corpus callosum/glia:7.52 pineal gland:- peripheral nerve:7.29 spine:7.35 retina:- eye:- artery/aorta:7.40 vein:7.53 lymphnode:7.47 peripheral blood:- spleen:7.12 thymus:6.84 bone marrow:7.50 adipose:7.39 bone:- skin:7.58
CAGE cerebrum:0.02 cerebellum:- brain stem:0.74 corpus callosum/glia:0 pineal gland:1.07 peripheral nerve:- spine:0.17 retina:- eye:- artery/aorta:0.47 vein:0 lymphnode:2.31 peripheral blood:- spleen:0 thymus:0.12 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.03 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.02 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:18.20 placenta:7.30 prostate:- ovary:- testis:- heart:- muscle:- esophagus:342.80 stomach:- intestine:- colon:17     liver/hepato:-        lung:9.80    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:7.23 placenta:7.54 prostate:6.94 ovary:7.11 testis:7.05 heart:7.55 muscle:7.54 esophagus:8.74 stomach:7.36 intestine:7.37 colon:7.52 liver/hepato:7.39 lung:7.36 bladder:- kidney:7.29 pituitary:7.30 thyroid/parathyroid:7.07 adrenal gland:7.24 pancreas:7.70 breast:7.10 salivary:7.49
CAGE uterus:1.18 placenta:2.13 prostate:0.08 ovary:0.07 testis:0 heart:0 muscle:0 esophagus:4.43 stomach:- intestine:0 colon:0     liver/hepato:0    lung:0 bladder:1.18 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0.62
RNA-seq uterus:- placenta:- prostate:0.08 ovary:0.01 testis:0.08 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0.01     liver/hepato:0.00        lung:0    bladder:- kidney:0.05 pituitary:- thyroid/parathyroid:0 adrenal gland:0 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_013358
Gene ID 29943
Unigene ID Hs.412941
Probe set ID 220962_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000142623
GTEx ID ENSG00000142623

Orthologous Gene

Mouse[1]  NM_011059
Rat [0]  

Chromosomal Region

1p36.13  [17,531,621  -  17,572,500]

Gene Family (Interpro ID)

IPR004303  Protein-arginine deiminase
IPR016296  Protein-arginine deiminase, subgroup

Link to Pubmed  (Pubmed ID)

8125298
12416996
12477932
14579251
14702039
15087120
15150696
15675958
16091842
16196087
16710414
16973334
17851584
18669583
18710930
20596086

Gene Ontology  (GO ID)

Biological Process

GO:0018101  peptidyl-citrulline biosynthetic process from peptidyl-arginine

Cellular Component

GO:0005737  cytoplasm

Molecular Function

GO:0005509  calcium ion binding
GO:0004668  protein-arginine deiminase activity