host cell factor C1 (VP16-accessory protein)

Synonym

HFC1, VCAF, C1 factor, HCFC1, VP16 accessory protein, HCF, host cell factor C1 (VP16-accessory protein), MGC70925, HCF-1, CFF, Host cell factor, HCF1

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

cerebrum:21.30

cerebellum:12.60

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:30.70

spine:-

retina:-

eye:47

artery/aorta:30

vein:-

lymphnode:91

peripheral blood:72.90

spleen:-

thymus:51.50

bone marrow:118.10

adipose:80.70

bone:12.80

skin:52.80

GeneChip

cerebrum:7.07

cerebellum:7.37

brain stem:6.98

corpus callosum/glia:6.99

pineal gland:-

peripheral nerve:6.95

spine:6.89

retina:-

eye:-

artery/aorta:7.17

vein:7.24

lymphnode:7.39

peripheral blood:-

spleen:7.51

thymus:7.77

bone marrow:7.57

adipose:6.99

bone:-

skin:7.22

CAGE

cerebrum:3.74

cerebellum:-

brain stem:3.45

corpus callosum/glia:3.72

pineal gland:3.74

peripheral nerve:-

spine:3.97

retina:-

eye:-

artery/aorta:3.90

vein:3.86

lymphnode:3.81

peripheral blood:-

spleen:3.61

thymus:4.57

bone marrow:-

adipose:3.45

bone:-

skin:-

RNA-seq

cerebrum:2.32

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:3.25

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:3.20

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

uterus:9.10

placenta:25.50

prostate:101.40

ovary:260.80

testis:13

heart:12.80

muscle:40.20

esophagus:-

stomach:63.70

intestine:-

colon:93.30

liver/hepato:31.70

lung:34.20

bladder:-

kidney:41.60

pituitary:-

thyroid/parathyroid:-

adrenal gland:-

pancreas:71.10

breast:167.30

salivary:-

GeneChip

uterus:7.34

placenta:7.15

prostate:7.25

ovary:7.32

testis:7.14

heart:7.05

muscle:7.03

esophagus:7.28

stomach:7.37

intestine:7.14

colon:7.49

liver/hepato:6.96

lung:7.07

bladder:-

kidney:7.16

pituitary:7.28

thyroid/parathyroid:7.29

adrenal gland:7.22

pancreas:6.72

breast:7.44

salivary:7.12

CAGE

uterus:3.66

placenta:3.42

prostate:3.17

ovary:3.66

testis:3.56

heart:3.58

muscle:3.49

esophagus:3.34

stomach:-

intestine:3.32

colon:3.74

liver/hepato:3.40

lung:3.70

bladder:3.14

kidney:3.23

pituitary:3.59

thyroid/parathyroid:3.20

adrenal gland:-

pancreas:3.42

breast:3.58

salivary:4.03

RNA-seq

uterus:-

placenta:-

prostate:2.79

ovary:3.62

testis:3.20

heart:2.16

muscle:2.64

esophagus:-

stomach:-

intestine:-

colon:2.47

liver/hepato:2.08

lung:2.59

bladder:-

kidney:2.53

pituitary:-

thyroid/parathyroid:3.15

adrenal gland:3.19

pancreas:-

breast:2.73

salivary:-

IDs

Refseq ID	NM_005334
Gene ID	3054
Unigene ID	Hs.83634
Probe set ID	202474_s_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000172534
GTEx ID	ENSG00000172534

Orthologous Gene

Mouse[6]	NM_008224
Rat[1]	NM_001139507

Chromosomal Region

Xq28 [153,213,004 - 153,237,258]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

IPR003961	Fibronectin, type III
IPR008957	Fibronectin, type III-like fold

Gene Ontology (GO ID)

Biological Process

GO:0007049	cell cycle
GO:0043984	histone H4-K16 acetylation
GO:0043981	histone H4-K5 acetylation
GO:0043982	histone H4-K8 acetylation
GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0045787	positive regulation of cell cycle
GO:0010628	positive regulation of gene expression
GO:0050821	protein stabilization
GO:0019046	reactivation of latent virus
GO:0043254	regulation of protein complex assembly
GO:0006355	regulation of transcription, DNA-dependent
GO:0006366	transcription from RNA polymerase II promoter
GO:0019048	virus-host interaction

Cellular Component

GO:0005671	Ada2/Gcn5/Ada3 transcription activator complex
GO:0043025	cell soma
GO:0005737	cytoplasm
GO:0000123	histone acetyltransferase complex
GO:0005739	mitochondrion
GO:0071339	MLL1 complex
GO:0070688	MLL5-L complex
GO:0005730	nucleolus
GO:0005634	nucleus
GO:0070461	SAGA-type complex
GO:0048188	Set1C/COMPASS complex

Molecular Function

GO:0003682	chromatin binding
GO:0046972	histone acetyltransferase activity (H4-K16 specific)
GO:0043995	histone acetyltransferase activity (H4-K5 specific)
GO:0043996	histone acetyltransferase activity (H4-K8 specific)
GO:0042802	identical protein binding
GO:0005515	protein binding
GO:0003713	transcription coactivator activity
GO:0003700	transcription factor activity

host cell factor C1 (VP16-accessory protein)

Synonym

Expression Pattern

Choropleth map on BodyParts3D

Classification in 40 Organs

Gene Information

IDs

Orthologous Gene

Chromosomal Region

Gene Family (Interpro ID)

Link to Pubmed (Pubmed ID)

Gene Ontology (GO ID)

Biological Process

Cellular Component

Molecular Function