apolipoprotein F

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Synonym

Lipid transfer inhibitor protein, apolipoprotein F, LTIP, DKFZp781G18150, Apo-F, MGC22520, APOF, Apolipoprotein F precursor

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:3.12 cerebellum:3.09 brain stem:3.12 corpus callosum/glia:3.07 pineal gland:- peripheral nerve:3.03 spine:3.09 retina:- eye:- artery/aorta:3.10 vein:3.16 lymphnode:3.05 peripheral blood:- spleen:3.08 thymus:2.84 bone marrow:3.20 adipose:3.07 bone:- skin:3.06
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0.03 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:84.40        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:18.60 salivary:-
GeneChip uterus:3.04 placenta:2.97 prostate:3.07 ovary:3.09 testis:2.95 heart:3.07 muscle:3.12 esophagus:3 stomach:3.04 intestine:3.10 colon:3.07 liver/hepato:8.45 lung:3.17 bladder:- kidney:3.06 pituitary:3.03 thyroid/parathyroid:3.06 adrenal gland:3.12 pancreas:2.98 breast:3.09 salivary:3.12
CAGE uterus:0 placenta:0 prostate:0.21 ovary:0 testis:0.12 heart:0.03 muscle:0 esophagus:0 stomach:- intestine:0 colon:0.04     liver/hepato:5.51    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0.62
RNA-seq uterus:- placenta:- prostate:0.10 ovary:0 testis:0.24 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:7.47        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0.03 adrenal gland:0.01 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_001638
Gene ID 319
Unigene ID Hs.534302
Probe set ID 207262_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000175336
GTEx ID ENSG00000175336

Orthologous Gene

Mouse[1]  NM_133997
Rat[1]  NM_001024351

Chromosomal Region

12q13.3  [56,754,353  -  56,756,607]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

204339
6816269
8093033
9880564
12477932
12907677
14718574
15172102
15489334
17207965
17901467
18369235
19878569
20331378
20602615
20691829
20855565
21937674
24144296
24211198

Gene Ontology  (GO ID)

Biological Process

GO:0033344  cholesterol efflux
GO:0008203  cholesterol metabolic process
GO:0006629  lipid metabolic process
GO:0006869  lipid transport
GO:0006641  triglyceride metabolic process

Cellular Component

GO:0005576  extracellular region
GO:0034364  high-density lipoprotein particle
GO:0034362  low-density lipoprotein particle

Molecular Function

GO:0015485  cholesterol binding
GO:0005319  lipid transporter activity
GO:0005102  receptor binding