apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1

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Synonym

Apolipoprotein B mRNA-editing enzyme 1, BEDP, APOBEC-1, CDAR1, HEPR, C->U-editing enzyme APOBEC-1, APOBEC1

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:- cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:37.80 thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:4.34 cerebellum:4.34 brain stem:4.41 corpus callosum/glia:4.19 pineal gland:- peripheral nerve:4.06 spine:4.30 retina:- eye:- artery/aorta:4.45 vein:4.27 lymphnode:4.06 peripheral blood:- spleen:3.92 thymus:3.89 bone marrow:4.44 adipose:4.09 bone:- skin:4.19
CAGE cerebrum:0 cerebellum:- brain stem:0 corpus callosum/glia:0 pineal gland:0 peripheral nerve:- spine:0 retina:- eye:- artery/aorta:0 vein:0 lymphnode:0 peripheral blood:- spleen:0 thymus:0 bone marrow:- adipose:0 bone:- skin:-
RNA-seq cerebrum:0 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:4.30 heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:4.02 placenta:4.05 prostate:3.77 ovary:4.05 testis:4.01 heart:4.19 muscle:4.49 esophagus:4.05 stomach:4.27 intestine:5.19 colon:4.38 liver/hepato:4.07 lung:3.91 bladder:- kidney:4.14 pituitary:4.08 thyroid/parathyroid:3.98 adrenal gland:4.15 pancreas:4.58 breast:4.02 salivary:4.33
CAGE uterus:0 placenta:0 prostate:0 ovary:0 testis:0 heart:0 muscle:0 esophagus:0 stomach:- intestine:4.29 colon:1.61     liver/hepato:0    lung:0 bladder:0 kidney:0 pituitary:0 thyroid/parathyroid:0 adrenal gland:- pancreas:0 breast:0 salivary:0
RNA-seq uterus:- placenta:- prostate:0 ovary:0 testis:0.32 heart:0 muscle:0 esophagus:- stomach:- intestine:- colon:0     liver/hepato:0.13        lung:0    bladder:- kidney:0 pituitary:- thyroid/parathyroid:0.07 adrenal gland:0.05 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_001644
Gene ID 339
Unigene ID Hs.560000
Probe set ID 207158_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000111701
GTEx ID ENSG00000111701

Orthologous Gene

Mouse[2]  NM_001134391, NM_031159
Rat [0]  

Chromosomal Region

12p13.31  [7,801,996  -  7,818,499]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

7698776
7736571
8078915
8208612
8692961
8999813
8999814
9186903
9479499
10669759
10781591
11134005
11352648
11577082
11584023
11698249
11727199
11815617
12477932
12683974
12881431
12896982
14559896
15516966
15659357
15979078
16999936
17696929
18051367
18971252
19911124
19913121
19932086
19965785
20331378
20348446
20628086

Gene Ontology  (GO ID)

Biological Process

GO:0032869  cellular response to insulin stimulus
GO:0009972  cytidine deamination
GO:0016554  cytidine to uridine editing
GO:0051607  defense response to virus
GO:0080111  DNA demethylation
GO:0010467  gene expression
GO:0006629  lipid metabolic process
GO:0042158  lipoprotein biosynthetic process
GO:0042953  lipoprotein transport
GO:0016556  mRNA modification
GO:0006397  mRNA processing
GO:0048255  mRNA stabilization
GO:0042127  regulation of cell proliferation
GO:0051592  response to calcium ion
GO:0042493  response to drug
GO:0045471  response to ethanol
GO:0010332  response to gamma radiation
GO:0006970  response to osmotic stress
GO:0010043  response to zinc ion
GO:0006396  RNA processing

Cellular Component

GO:0005737  cytoplasm
GO:0005654  nucleoplasm

Molecular Function

GO:0017091  AU-rich element binding
GO:0004126  cytidine deaminase activity
GO:0005515  protein binding
GO:0003723  RNA binding
GO:0008270  zinc ion binding