ring finger protein, LIM domain interacting

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Synonym

RNF12, R-LIM, MGC15161, RING finger LIM domain-binding protein, NY-REN-43 antigen, ring finger protein 12, LIM domain-interacting RING finger protein, RING finger protein 12, NY-REN-43, RLIM

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:8.99 cerebellum:8.91 brain stem:9.12 corpus callosum/glia:9.57 pineal gland:- peripheral nerve:9.69 spine:9.72 retina:- eye:- artery/aorta:10.23 vein:9.88 lymphnode:10.97 peripheral blood:- spleen:10.74 thymus:10.97 bone marrow:10.61 adipose:10.67 bone:- skin:10.77
CAGE cerebrum:2.90 cerebellum:- brain stem:2.95 corpus callosum/glia:2.41 pineal gland:3.01 peripheral nerve:- spine:2.95 retina:- eye:- artery/aorta:2.32 vein:2.25 lymphnode:1.92 peripheral blood:- spleen:2.30 thymus:2.36 bone marrow:- adipose:2.70 bone:- skin:-
RNA-seq cerebrum:0.28 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.34 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.48 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:10.61 placenta:9.47 prostate:10.93 ovary:10.88 testis:11.61 heart:9.22 muscle:7.88 esophagus:11.33 stomach:10.43 intestine:9.70 colon:10 liver/hepato:9.92 lung:10.08 bladder:- kidney:9.60 pituitary:9.26 thyroid/parathyroid:10.21 adrenal gland:10.23 pancreas:9.91 breast:10.81 salivary:11.70
CAGE uterus:2.32 placenta:2.33 prostate:2.24 ovary:2.60 testis:2.37 heart:2.32 muscle:2.56 esophagus:2.48 stomach:- intestine:2.08 colon:1.53     liver/hepato:2.05    lung:2.58 bladder:2.58 kidney:2.19 pituitary:3.06 thyroid/parathyroid:2.33 adrenal gland:- pancreas:2.26 breast:2.19 salivary:1.82
RNA-seq uterus:- placenta:- prostate:0.22 ovary:1.15 testis:0.45 heart:0.22 muscle:0.20 esophagus:- stomach:- intestine:- colon:0.62     liver/hepato:0.00        lung:1.47    bladder:- kidney:0.27 pituitary:- thyroid/parathyroid:0.81 adrenal gland:0.00 pancreas:- breast:0.19 salivary:-

Gene Information

IDs

Refseq ID NM_183353
Gene ID 51132
Unigene ID -
Probe set ID 215823_x_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000131263
GTEx ID ENSG00000131263

Orthologous Gene

Mouse[8]  NM_011276
Rat[1]  NM_001024892

Chromosomal Region

Xq13.2  [73,805,052  -  73,834,452]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

10431247
10508479
11013082
11882901
12477932
12874135
14702039
16196087
17437998
18029348
18073335
18775313
19117995
19164295
19549727
19945382
20211142
20423330
21903422
21906983
21945933
21963094
21987572
21988832
22379092
22493095
22493164
22505724
22596162
23105109
23650532
23904271
24686088

Gene Ontology  (GO ID)

Biological Process

GO:0043433  negative regulation of transcription factor activity
GO:0000122  negative regulation of transcription from RNA polymerase II promoter
GO:0045892  negative regulation of transcription, DNA-dependent
GO:0016567  protein ubiquitination
GO:0060816  random inactivation of X chromosome
GO:0006351  transcription, DNA-dependent
GO:0006511  ubiquitin-dependent protein catabolic process

Cellular Component

GO:0005737  cytoplasm
GO:0005634  nucleus
GO:0017053  transcriptional repressor complex

Molecular Function

GO:0003714  transcription corepressor activity
GO:0004842  ubiquitin-protein ligase activity
GO:0008270  zinc ion binding