DEAD (Asp-Glu-Ala-Asp) box polypeptide 47

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Synonym

DKFZp564O176, FLJ30012, E4-DBP, Probable ATP-dependent RNA helicase DDX47, DEAD box protein 47, MSTP162, DEAD (Asp-Glu-Ala-Asp) box polypeptide 47, HQ0256, DDX47

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:23.70 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:92 spine:- retina:355.90 eye:23.50 artery/aorta:- vein:- lymphnode:30.30 peripheral blood:- spleen:- thymus:51.50 bone marrow:39.40 adipose:- bone:12.80 skin:33.60
GeneChip cerebrum:7.30 cerebellum:7.77 brain stem:7.47 corpus callosum/glia:7.69 pineal gland:- peripheral nerve:7.64 spine:7.57 retina:- eye:- artery/aorta:7.63 vein:8.04 lymphnode:8.04 peripheral blood:- spleen:8.03 thymus:8.31 bone marrow:7.35 adipose:7.78 bone:- skin:7.94
CAGE cerebrum:3.54 cerebellum:- brain stem:3.70 corpus callosum/glia:3.73 pineal gland:3.18 peripheral nerve:- spine:3.46 retina:- eye:- artery/aorta:3.49 vein:3.48 lymphnode:3.59 peripheral blood:- spleen:3.60 thymus:3.60 bone marrow:- adipose:3.80 bone:- skin:-
RNA-seq cerebrum:0.82 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0.00 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.32 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:36.50 placenta:76.50 prostate:- ovary:- testis:56.20 heart:25.50 muscle:20.10 esophagus:- stomach:- intestine:- colon:101.80     liver/hepato:21.10        lung:58.70    bladder:- kidney:20.80 pituitary:- thyroid/parathyroid:- adrenal gland:50.80 pancreas:160 breast:18.60 salivary:-
GeneChip uterus:8.28 placenta:7.97 prostate:8.01 ovary:8.38 testis:7.82 heart:7.44 muscle:8.15 esophagus:8.02 stomach:7.76 intestine:7.76 colon:7.34 liver/hepato:7.67 lung:8.09 bladder:- kidney:7.61 pituitary:7.33 thyroid/parathyroid:8.29 adrenal gland:7.57 pancreas:7.66 breast:8.20 salivary:7.55
CAGE uterus:3.84 placenta:3.62 prostate:3.82 ovary:3.78 testis:3.87 heart:3.25 muscle:3.46 esophagus:3.73 stomach:- intestine:3.39 colon:3.39     liver/hepato:3.84    lung:3.30 bladder:3.96 kidney:3.74 pituitary:3.63 thyroid/parathyroid:3.98 adrenal gland:- pancreas:3.45 breast:3.12 salivary:3.80
RNA-seq uterus:- placenta:- prostate:0.39 ovary:0.16 testis:0.00 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.00 pituitary:- thyroid/parathyroid:0.10 adrenal gland:0.80 pancreas:- breast:0.71 salivary:-

Gene Information

IDs

Refseq ID NM_201224
Gene ID 51202
Unigene ID Hs.23388
Probe set ID 220890_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000213782
GTEx ID ENSG00000213782

Orthologous Gene

Mouse[1]  NM_026360
Rat [0]  

Chromosomal Region

12p13.1  [12,966,250  -  12,982,915]

Gene Family (Interpro ID)

IPR014001  DEAD-like helicase, N-terminal
IPR014021  Helicase, superfamily 1/2, ATP-binding domain

Link to Pubmed  (Pubmed ID)

8125298
11024137
11076863
11230166
11256614
12429849
12477932
14702039
15102925
15489334
15489336
15635413
15977068
16381901
16963496
17932509
18029348
18482256
19471022
19615732
19710015
19738201
19946888
20706999
21081666
21110914
21139048
21145461
21693764
21832049
21890473
21906983
21907836
21963094
21988832
22174317
22505724
22939629
23000965
23602568
24244333
24457600
24816145

Gene Ontology  (GO ID)

Biological Process

GO:0008625  induction of apoptosis via death domain receptors
GO:0006397  mRNA processing
GO:0008380  RNA splicing
GO:0006364  rRNA processing

Cellular Component

GO:0005730  nucleolus

Molecular Function

GO:0005524  ATP binding
GO:0008026  ATP-dependent helicase activity
GO:0005515  protein binding
GO:0003723  RNA binding