ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast)

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Synonym

Non-canonical ubiquitin-conjugating enzyme 1, HSU93243, NCUBE1, UBE2J1, Ubc6p, Yeast ubiquitin-conjugating enzyme UBC6 homolog E, HSPC153, HSUBC6e, Ubiquitin-conjugating enzyme E2 J1, MGC12555, CGI-76, HSPC205

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:33.20 cerebellum:25.20 brain stem:- corpus callosum/glia:58.30 pineal gland:445 peripheral nerve:30.70 spine:- retina:- eye:70.50 artery/aorta:179.90 vein:66.60 lymphnode:475.20 peripheral blood:18.20 spleen:- thymus:90.20 bone marrow:118.10 adipose:- bone:102.40 skin:105.60
GeneChip cerebrum:5.34 cerebellum:5.44 brain stem:5.62 corpus callosum/glia:5.95 pineal gland:- peripheral nerve:5.90 spine:5.77 retina:- eye:- artery/aorta:6.09 vein:5.77 lymphnode:7.17 peripheral blood:- spleen:7.11 thymus:7.77 bone marrow:7.12 adipose:6.38 bone:- skin:6.11
CAGE cerebrum:3.72 cerebellum:- brain stem:3.84 corpus callosum/glia:3.78 pineal gland:3.92 peripheral nerve:- spine:4.05 retina:- eye:- artery/aorta:4.48 vein:4.52 lymphnode:5.07 peripheral blood:- spleen:5.07 thymus:4.82 bone marrow:- adipose:4.24 bone:- skin:-
RNA-seq cerebrum:3.95 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:5.77 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:4.14 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:127.60 placenta:87.40 prostate:78.90 ovary:37.30 testis:26 heart:114.90 muscle:20.10 esophagus:- stomach:- intestine:- colon:33.90     liver/hepato:63.30        lung:88    bladder:- kidney:114.40 pituitary:- thyroid/parathyroid:163.70 adrenal gland:- pancreas:133.40 breast:130.10 salivary:328.40
GeneChip uterus:7.09 placenta:6.89 prostate:7.91 ovary:6.86 testis:5.32 heart:5.77 muscle:5.34 esophagus:6.30 stomach:7.14 intestine:6.88 colon:6.78 liver/hepato:6.02 lung:6.79 bladder:- kidney:5.93 pituitary:5.88 thyroid/parathyroid:6.57 adrenal gland:6.53 pancreas:6.90 breast:6.29 salivary:6.88
CAGE uterus:4.20 placenta:4.52 prostate:4.30 ovary:4.14 testis:4.46 heart:4.36 muscle:3.77 esophagus:4.25 stomach:- intestine:4.85 colon:4.78     liver/hepato:4.63    lung:4.56 bladder:4.20 kidney:4.18 pituitary:3.80 thyroid/parathyroid:4.11 adrenal gland:- pancreas:5.05 breast:4.73 salivary:4.75
RNA-seq uterus:- placenta:- prostate:4.07 ovary:4.64 testis:4.42 heart:3.09 muscle:2.93 esophagus:- stomach:- intestine:- colon:4.12     liver/hepato:3.83        lung:4.75    bladder:- kidney:4.55 pituitary:- thyroid/parathyroid:3.99 adrenal gland:5.25 pancreas:- breast:3.89 salivary:-

Gene Information

IDs

Refseq ID NM_016021
Gene ID 51465
Unigene ID Hs.163776
Probe set ID 217823_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000198833
GTEx ID ENSG00000198833

Orthologous Gene

Mouse[2]  NM_019586
Rat[2]  NM_019586

Chromosomal Region

6q15  [90,036,344  -  90,062,567]

Gene Family (Interpro ID)

IPR000608  Ubiquitin-conjugating enzyme, E2
IPR016135  Ubiquitin-conjugating enzyme/RWD-like

Link to Pubmed  (Pubmed ID)

8125298
10708578
10810093
11042152
11439185
12082160
12150907
12477932
12933904
14574404
15489334
15603737
15861135
16442531
16720581
16862145
16901789
17597759
18711132
19322201
19549727
19690564
20222955
20435896
21139048
21245296
21594788
21857022
21890473
21906983
23097496
24020373

Gene Ontology  (GO ID)

Biological Process

GO:0030433  ER-associated protein catabolic process
GO:0018279  protein amino acid N-linked glycosylation via asparagine

Cellular Component

GO:0005789  endoplasmic reticulum membrane
GO:0016021  integral to membrane

Molecular Function

GO:0005524  ATP binding
GO:0004842  ubiquitin-protein ligase activity