vacuolar protein sorting 54 homolog (S. cerevisiae)

Synonym

Hepatocellular carcinoma protein 8, VPS54, vacuolar protein sorting 54 (S. cerevisiae), hVps54L, HCC8, SLP-8p, Tumor antigen SLP-8p, vacuolar protein sorting 54 (yeast), VPS54L, Vacuolar protein sorting-associated protein 54

normal 40 tissues
cell lines, primary cells, adult tissues and fetal tissues (FANTOM5 CAGE)

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain

blood

connective

EST

nodata

GeneChip

cerebrum:5.27

cerebellum:5.59

brain stem:5.29

corpus callosum/glia:5.87

pineal gland:-

peripheral nerve:5.91

spine:5.68

retina:-

eye:-

artery/aorta:5.91

vein:5.65

lymphnode:5.92

peripheral blood:-

spleen:6.30

thymus:6.49

bone marrow:6.46

adipose:6.10

bone:-

skin:6.18

CAGE

cerebrum:2.63

cerebellum:-

brain stem:2.96

corpus callosum/glia:2.87

pineal gland:3.01

peripheral nerve:-

spine:2.73

retina:-

eye:-

artery/aorta:2.92

vein:3.00

lymphnode:2.82

peripheral blood:-

spleen:3.03

thymus:3.12

bone marrow:-

adipose:3.13

bone:-

skin:-

RNA-seq

cerebrum:2.05

cerebellum:-

brain stem:-

corpus callosum/glia:-

pineal gland:-

peripheral nerve:-

spine:-

retina:-

eye:-

artery/aorta:-

vein:-

lymphnode:2.89

peripheral blood:-

spleen:-

thymus:-

bone marrow:-

adipose:2.65

bone:-

skin:-

reproductive

muscular

alimentary

liver

lung

urinary

endo/exo-crine

EST

nodata

GeneChip

uterus:6.53

placenta:6.35

prostate:7.51

ovary:6.41

testis:6.66

heart:5.59

muscle:5.69

esophagus:6.07

stomach:6.02

intestine:6.08

colon:5.34

liver/hepato:5.87

lung:6.07

bladder:-

kidney:5.98

pituitary:6.46

thyroid/parathyroid:6.45

adrenal gland:6.06

pancreas:6.24

breast:6.14

salivary:7.37

CAGE

uterus:3.37

placenta:2.86

prostate:3.19

ovary:3.28

testis:2.88

heart:3.08

muscle:2.65

esophagus:3.02

stomach:-

intestine:3.21

colon:3.10

liver/hepato:3.03

lung:3.36

bladder:3.08

kidney:2.95

pituitary:3.56

thyroid/parathyroid:3.08

adrenal gland:-

pancreas:2.98

breast:2.79

salivary:3.58

RNA-seq

uterus:-

placenta:-

prostate:1.73

ovary:3.20

testis:2.54

heart:1.99

muscle:1.60

esophagus:-

stomach:-

intestine:-

colon:2.26

liver/hepato:2.46

lung:2.90

bladder:-

kidney:3.16

pituitary:-

thyroid/parathyroid:3.31

adrenal gland:3.06

pancreas:-

breast:2.04

salivary:-

IDs

Refseq ID	NM_001005739
Gene ID	51542
Unigene ID	-
Probe set ID	218423_x_at [HG-U133_Plus_2]
Ensembl ID	ENSG00000143952
GTEx ID	ENSG00000143952

Orthologous Gene

Mouse[2]	NM_139061
Rat[1]	NM_173147

Chromosomal Region

2p14 [64,120,035 - 64,246,567]

Search genes near this gene
- Between -5kb and +5kb
- Between -10kb and +10kb

Gene Family (Interpro ID)

Gene Ontology (GO ID)

Biological Process

GO:0040007	growth
GO:0048873	homeostasis of number of cells within a tissue
GO:0050881	musculoskeletal movement
GO:0060052	neurofilament cytoskeleton organization
GO:0015031	protein transport
GO:0042147	retrograde transport, endosome to Golgi