chromosome 1 open reading frame 27

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Synonym

chromosome 1 open reading frame 27, odr-4, TTG1, C1orf27, FLJ20505

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:24.90 cerebellum:12.60 brain stem:- corpus callosum/glia:58.30 pineal gland:- peripheral nerve:- spine:- retina:- eye:23.50 artery/aorta:- vein:- lymphnode:70.80 peripheral blood:36.40 spleen:18.90 thymus:38.70 bone marrow:39.40 adipose:- bone:38.40 skin:24
GeneChip cerebrum:6.34 cerebellum:6.22 brain stem:6.41 corpus callosum/glia:7.09 pineal gland:- peripheral nerve:6.73 spine:6.85 retina:- eye:- artery/aorta:6.24 vein:6.12 lymphnode:6.47 peripheral blood:- spleen:6.73 thymus:7 bone marrow:5.84 adipose:6.41 bone:- skin:6.28
CAGE cerebrum:3.28 cerebellum:- brain stem:3.51 corpus callosum/glia:2.99 pineal gland:3.93 peripheral nerve:- spine:3.55 retina:- eye:- artery/aorta:2.76 vein:2.44 lymphnode:2.30 peripheral blood:- spleen:2.67 thymus:2.60 bone marrow:- adipose:3.10 bone:- skin:-
RNA-seq cerebrum:0.00 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:0 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:54.70 placenta:54.60 prostate:22.50 ovary:37.30 testis:34.60 heart:38.30 muscle:60.30 esophagus:- stomach:- intestine:64.80 colon:17     liver/hepato:31.70        lung:58.70    bladder:251.20 kidney:93.60 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:71.10 breast:27.90 salivary:-
GeneChip uterus:6.82 placenta:7.08 prostate:7.37 ovary:6.90 testis:6.69 heart:6.36 muscle:5.85 esophagus:6.52 stomach:6.80 intestine:6.64 colon:5.47 liver/hepato:7.11 lung:6.81 bladder:- kidney:6.29 pituitary:6.43 thyroid/parathyroid:7.06 adrenal gland:6.89 pancreas:7.55 breast:6.68 salivary:7.18
CAGE uterus:2.91 placenta:2.96 prostate:2.98 ovary:2.94 testis:2.66 heart:2.67 muscle:2.30 esophagus:2.79 stomach:- intestine:3.22 colon:2.47     liver/hepato:3.35    lung:2.99 bladder:2.95 kidney:3.23 pituitary:3.70 thyroid/parathyroid:3.07 adrenal gland:- pancreas:3.02 breast:2.79 salivary:2.88
RNA-seq uterus:- placenta:- prostate:0.00 ovary:0.22 testis:0.09 heart:0.00 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:0.00        lung:0.00    bladder:- kidney:0.86 pituitary:- thyroid/parathyroid:0.00 adrenal gland:0.00 pancreas:- breast:0 salivary:-

Gene Information

IDs

Refseq ID NM_001164245
Gene ID 54953
Unigene ID Hs.371210
Probe set ID 218721_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000157181
GTEx ID ENSG00000157181

Orthologous Gene

Mouse[4]  NM_001077237, NM_145511
Rat[4]  NM_001077237, NM_145511

Chromosomal Region

1q31.1  [186,344,890  -  186,390,507]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11318611
12477932
12868032
15718105
16344560
18187418
21139048
21706016
24250222

Gene Ontology  (GO ID)

Cellular Component

GO:0016021  integral to membrane

Molecular Function

GO:0016491  oxidoreductase activity
GO:0008270  zinc ion binding