acyl-CoA synthetase medium-chain family member 5

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Synonym

FLJ20581

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST nodata
GeneChip cerebrum:5.92 cerebellum:5.51 brain stem:6.31 corpus callosum/glia:6.34 pineal gland:- peripheral nerve:6.20 spine:6.64 retina:- eye:- artery/aorta:5.66 vein:6 lymphnode:5.58 peripheral blood:- spleen:5.38 thymus:5.09 bone marrow:5.71 adipose:6.73 bone:- skin:5.73
CAGE cerebrum:1.07 cerebellum:- brain stem:1.64 corpus callosum/glia:1.74 pineal gland:0.35 peripheral nerve:- spine:1.72 retina:- eye:- artery/aorta:0.79 vein:2.09 lymphnode:0.93 peripheral blood:- spleen:0.71 thymus:0.23 bone marrow:- adipose:2.98 bone:- skin:-
RNA-seq cerebrum:0.43 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.22 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:1.77 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST nodata
GeneChip uterus:5.11 placenta:5.47 prostate:4.90 ovary:5.28 testis:4.93 heart:5.76 muscle:6.22 esophagus:5.30 stomach:5.31 intestine:5.37 colon:5.58 liver/hepato:10.06 lung:5.55 bladder:- kidney:6.87 pituitary:5.28 thyroid/parathyroid:5.82 adrenal gland:5.50 pancreas:5.67 breast:5.83 salivary:5.47
CAGE uterus:0.79 placenta:0.54 prostate:0.74 ovary:0.52 testis:0.94 heart:0.72 muscle:1.76 esophagus:0.63 stomach:- intestine:0.33 colon:0.87     liver/hepato:4.42    lung:1.02 bladder:0.46 kidney:2.42 pituitary:0.24 thyroid/parathyroid:1.19 adrenal gland:- pancreas:1.21 breast:1.92 salivary:0.36
RNA-seq uterus:- placenta:- prostate:0.85 ovary:0.21 testis:0.59 heart:0.26 muscle:0.85 esophagus:- stomach:- intestine:- colon:1.13     liver/hepato:4.50        lung:0.28    bladder:- kidney:2.09 pituitary:- thyroid/parathyroid:0.84 adrenal gland:0.30 pancreas:- breast:2.82 salivary:-

Gene Information

IDs

Refseq ID NM_017888
Gene ID 54988
Unigene ID -
Probe set ID 220061_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000183549
GTEx ID ENSG00000183549

Orthologous Gene

Mouse[1]  NM_178758
Rat[1]  NM_001014162

Chromosomal Region

16p12.3  [20,420,856  -  20,452,658]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

11752456
12477932
17762044
20383146
20877624
21988832

Gene Ontology  (GO ID)

Biological Process

GO:0006631  fatty acid metabolic process

Cellular Component

GO:0005759  mitochondrial matrix

Molecular Function

GO:0005524  ATP binding
GO:0047760  butyrate-CoA ligase activity
GO:0005525  GTP binding
GO:0046872  metal ion binding