PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)

 jump to detail

Synonym

PRPF39, FLJ11128, FLJ20666

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:24.90 cerebellum:12.60 brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:11.80 artery/aorta:- vein:66.60 lymphnode:40.40 peripheral blood:36.40 spleen:- thymus:38.70 bone marrow:- adipose:- bone:- skin:33.60
GeneChip cerebrum:5.23 cerebellum:5.26 brain stem:5.21 corpus callosum/glia:5.89 pineal gland:- peripheral nerve:5.04 spine:5.51 retina:- eye:- artery/aorta:5.12 vein:4.83 lymphnode:5.67 peripheral blood:- spleen:5.50 thymus:6.48 bone marrow:4.93 adipose:5.22 bone:- skin:5.51
CAGE cerebrum:3.62 cerebellum:- brain stem:3.64 corpus callosum/glia:3.53 pineal gland:3.69 peripheral nerve:- spine:3.77 retina:- eye:- artery/aorta:2.88 vein:3.04 lymphnode:3.04 peripheral blood:- spleen:2.85 thymus:3.06 bone marrow:- adipose:2.98 bone:- skin:-
RNA-seq cerebrum:3.03 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:3.75 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:2.29 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:27.30 placenta:21.90 prostate:- ovary:- testis:38.90 heart:12.80 muscle:20.10 esophagus:- stomach:21.20 intestine:97.20 colon:8.50     liver/hepato:10.60        lung:9.80    bladder:- kidney:41.60 pituitary:- thyroid/parathyroid:163.70 adrenal gland:- pancreas:35.60 breast:18.60 salivary:-
GeneChip uterus:6 placenta:5.57 prostate:6.28 ovary:5.76 testis:4.65 heart:4.95 muscle:4.68 esophagus:4.88 stomach:5.17 intestine:5.09 colon:4.33 liver/hepato:5.07 lung:5.14 bladder:- kidney:4.79 pituitary:5.40 thyroid/parathyroid:5.37 adrenal gland:5.39 pancreas:4.33 breast:5.23 salivary:4.91
CAGE uterus:3.59 placenta:3.17 prostate:3.27 ovary:3.24 testis:2.81 heart:3.01 muscle:2.96 esophagus:2.85 stomach:- intestine:3.24 colon:3.11     liver/hepato:2.14    lung:2.91 bladder:3.05 kidney:2.83 pituitary:3.94 thyroid/parathyroid:2.75 adrenal gland:- pancreas:2.60 breast:3.12 salivary:2.83
RNA-seq uterus:- placenta:- prostate:3.84 ovary:4.25 testis:3.23 heart:2.36 muscle:2.24 esophagus:- stomach:- intestine:- colon:2.76     liver/hepato:2.11        lung:2.87    bladder:- kidney:3.48 pituitary:- thyroid/parathyroid:3.78 adrenal gland:3.57 pancreas:- breast:3.25 salivary:-

Gene Information

IDs

Refseq ID NM_017922
Gene ID 55015
Unigene ID Hs.274337
Probe set ID 220553_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000185246
GTEx ID ENSG00000185246

Orthologous Gene

Mouse[3]  NM_177806
Rat[3]  NM_177806

Chromosomal Region

14q21.2  [45,553,302  -  45,585,485]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

12477932
14702039
15489334
16344560
18029348
21081666
21139048
21145461
22773733
22863883
24250222

Gene Ontology  (GO ID)

Biological Process

GO:0006397  mRNA processing
GO:0008380  RNA splicing

Cellular Component

GO:0005730  nucleolus
GO:0005634  nucleus