leucine rich repeat containing 8 family, member D

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Synonym

Leucine-rich repeat-containing protein 8D, LRRC5, leucine rich repeat containing 5, FLJ20403, FLJ10470, leucine rich repeat containing 8 family, member D, UNQ213/PRO239, LRRC8D

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:1.20 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:- bone marrow:- adipose:- bone:- skin:-
GeneChip cerebrum:8.05 cerebellum:6.98 brain stem:8.17 corpus callosum/glia:8.90 pineal gland:- peripheral nerve:8.09 spine:8.37 retina:- eye:- artery/aorta:6.29 vein:6.06 lymphnode:7.45 peripheral blood:- spleen:7.55 thymus:7.90 bone marrow:7.31 adipose:6.60 bone:- skin:6.48
CAGE cerebrum:3.83 cerebellum:- brain stem:4.39 corpus callosum/glia:4.86 pineal gland:3.13 peripheral nerve:- spine:4.18 retina:- eye:- artery/aorta:2.39 vein:3.00 lymphnode:3.24 peripheral blood:- spleen:3.27 thymus:3.33 bone marrow:- adipose:2.30 bone:- skin:-
RNA-seq cerebrum:0.96 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:2.56 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:0.00 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:- placenta:- prostate:- ovary:- testis:- heart:- muscle:- esophagus:- stomach:- intestine:- colon:-     liver/hepato:-        lung:-    bladder:- kidney:- pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:- salivary:-
GeneChip uterus:6.56 placenta:5.95 prostate:6.35 ovary:6.66 testis:6.91 heart:6.15 muscle:5.55 esophagus:6.44 stomach:6.55 intestine:6.93 colon:6.52 liver/hepato:7.34 lung:6.78 bladder:- kidney:7.56 pituitary:7.68 thyroid/parathyroid:7.31 adrenal gland:8.05 pancreas:7.08 breast:6.94 salivary:7.36
CAGE uterus:2.48 placenta:2.48 prostate:2.34 ovary:2.49 testis:3.15 heart:2.61 muscle:2.49 esophagus:2.08 stomach:- intestine:3.52 colon:2.93     liver/hepato:2.84    lung:2.78 bladder:2.45 kidney:3.40 pituitary:3.43 thyroid/parathyroid:2.92 adrenal gland:- pancreas:2.81 breast:2.27 salivary:3.34
RNA-seq uterus:- placenta:- prostate:2.41 ovary:0.98 testis:0.00 heart:0.64 muscle:0.00 esophagus:- stomach:- intestine:- colon:0.00     liver/hepato:1.62        lung:0.91    bladder:- kidney:0.53 pituitary:- thyroid/parathyroid:0.49 adrenal gland:1.01 pancreas:- breast:0.00 salivary:-

Gene Information

IDs

Refseq ID NM_001134479
Gene ID 55144
Unigene ID Hs.588647
Probe set ID 218684_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000171492
GTEx ID ENSG00000171492

Orthologous Gene

Mouse[2]  NM_001122768, NM_178701
Rat[1]  NM_001008338, NM_178701

Chromosomal Region

1p22.2  [90,286,573  -  90,402,170]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

8125298
8619474
9110174
12477932
12975309
14702039
15094057
15231747
15342556
15489334
16344560
16710414
18187620
19946888
21555518
21832049

Gene Ontology  (GO ID)

Cellular Component

GO:0016021  integral to membrane