LIM domain only 3 (rhombotin-like 2)

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Synonym

RBTNL2, RBTN3, RHOM3, DAT1, LIM-only protein 3, Rhom-3, LIM domain only 3 (rhombotin-like 2), MGC26081, LMO3, Neuronal-specific transcription factor DAT1, Rhombotin-3

Expression Pattern

Choropleth map on BodyParts3D

Choropleth maps on 3D human body images were generated by the relative gene expression values measured by GeneChip.

Classification in 40 Organs

brain blood connective
EST cerebrum:443.20 cerebellum:88.20 brain stem:- corpus callosum/glia:145.80 pineal gland:- peripheral nerve:30.70 spine:- retina:- eye:23.50 artery/aorta:- vein:- lymphnode:- peripheral blood:- spleen:- thymus:25.80 bone marrow:19.70 adipose:- bone:- skin:57.60
GeneChip cerebrum:9.07 cerebellum:6.35 brain stem:9.09 corpus callosum/glia:7.66 pineal gland:- peripheral nerve:6.56 spine:8.23 retina:- eye:- artery/aorta:6.76 vein:6.24 lymphnode:5.14 peripheral blood:- spleen:4.63 thymus:6.93 bone marrow:5.28 adipose:7.05 bone:- skin:5.95
CAGE cerebrum:4.70 cerebellum:- brain stem:3.70 corpus callosum/glia:3.87 pineal gland:1.80 peripheral nerve:- spine:3.61 retina:- eye:- artery/aorta:2.85 vein:3.11 lymphnode:0.84 peripheral blood:- spleen:0.17 thymus:2.08 bone marrow:- adipose:4.24 bone:- skin:-
RNA-seq cerebrum:4.15 cerebellum:- brain stem:- corpus callosum/glia:- pineal gland:- peripheral nerve:- spine:- retina:- eye:- artery/aorta:- vein:- lymphnode:1.38 peripheral blood:- spleen:- thymus:- bone marrow:- adipose:3.04 bone:- skin:-
reproductive muscular alimentary liver lung urinary endo/exo-crine
EST uterus:54.70 placenta:10.90 prostate:11.30 ovary:- testis:21.60 heart:- muscle:- esophagus:- stomach:- intestine:- colon:33.90     liver/hepato:31.70        lung:58.70    bladder:- kidney:10.40 pituitary:- thyroid/parathyroid:- adrenal gland:- pancreas:- breast:9.30 salivary:-
GeneChip uterus:7.01 placenta:4.68 prostate:6.38 ovary:5.08 testis:4.90 heart:6.07 muscle:5.46 esophagus:5.62 stomach:5.91 intestine:6.03 colon:6.74 liver/hepato:4.90 lung:7.61 bladder:- kidney:5.43 pituitary:8.21 thyroid/parathyroid:8.60 adrenal gland:6.11 pancreas:6.38 breast:5.54 salivary:5.54
CAGE uterus:3.92 placenta:0.43 prostate:4.48 ovary:2.17 testis:1.48 heart:1.56 muscle:1.46 esophagus:3.35 stomach:- intestine:2.22 colon:3.57     liver/hepato:0    lung:4.58 bladder:4.76 kidney:1.87 pituitary:3.81 thyroid/parathyroid:4.91 adrenal gland:- pancreas:3.20 breast:4.20 salivary:1.67
RNA-seq uterus:- placenta:- prostate:3.66 ovary:0.59 testis:0.91 heart:0.37 muscle:0.60 esophagus:- stomach:- intestine:- colon:3.41     liver/hepato:0.10        lung:0.96    bladder:- kidney:1.01 pituitary:- thyroid/parathyroid:4.53 adrenal gland:1.03 pancreas:- breast:1.61 salivary:-

Gene Information

IDs

Refseq ID NM_018640
Gene ID 55885
Unigene ID Hs.504908
Probe set ID 204424_s_at  [HG-U133_Plus_2]
Ensembl ID ENSG00000048540
GTEx ID ENSG00000048540

Orthologous Gene

Mouse[1]  NM_207222
Rat[1]  NM_207222

Chromosomal Region

12p12.3  [16,701,307  -  16,763,528]

Gene Family (Interpro ID)

-

Link to Pubmed  (Pubmed ID)

1507224
11489251
12477932
14702039
15489334
15930276
16189514
16344560
16713569
19995558
21573214
22011669
23322301
23823477

Gene Ontology  (GO ID)

Biological Process

GO:0006355  regulation of transcription, DNA-dependent
GO:0006351  transcription, DNA-dependent

Molecular Function

GO:0008270  zinc ion binding